HOCOMOCO-v13 HOCOMOCO v13
  • Browse
  • Subcollections
    HOCOMOCO-invivo HOCOMOCO-invitro HOCOMOCO-rSNP
  • Tools
    MoLoTool MACRO-APE PERFECTOS-APE
  • Downloads
    HOCOMOCO v13 HOCOMOCO v12 HOCOMOCO v11 HOCOMOCO v10 HOCOMOCO v9
  • Help
  • FAQ
v13 Core collection, Subfamily {2.1.2.1}: RAR (NR1B)
Motif LOGO Gene (human) Gene synonyms (human) Gene (mouse) Gene synonyms (mouse) Motif length Quality
Motif subtype Consensus Data sources
Aligned words TF superclass TF class TF family TF subfamily TFClass ID HGNC MGI EntrezGene (human) EntrezGene (mouse) UniProt ID (human) UniProt ID (mouse) UniProt AC (human) UniProt AC (mouse) GRECO-DB-TF
RARA.H13CORE.0.PSM.A RARA.H13CORE.0.PSM.A motif logo (RARA gene, RARA_HUMAN protein) RARA
(GeneCards)
NR1B1 Rara Nr1b1 11 A 0 nRAGGTCAhRn P+S+M 9748 Zinc-coordinating DNA-binding domains {2} (TFClass) Nuclear receptors with C4 zinc fingers {2.1} (TFClass) Thyroid hormone receptor-related {2.1.2} (TFClass) RAR (NR1B) {2.1.2.1} (TFClass) TFClass: 2.1.2.1.1 HGNC:9864 MGI:97856 GeneID:5914
(SSTAR profile)
GeneID:19401
(SSTAR profile)
RARA_HUMAN RARA_MOUSE P10276
(TFClass)
P11416
(TFClass)
yes
RARA.H13CORE.1.P.B RARA.H13CORE.1.P.B motif logo (RARA gene, RARA_HUMAN protein) RARA
(GeneCards)
NR1B1 Rara Nr1b1 19 B 1 vRRGKTCAnnnnvRGKdYW P 977 Zinc-coordinating DNA-binding domains {2} (TFClass) Nuclear receptors with C4 zinc fingers {2.1} (TFClass) Thyroid hormone receptor-related {2.1.2} (TFClass) RAR (NR1B) {2.1.2.1} (TFClass) TFClass: 2.1.2.1.1 HGNC:9864 MGI:97856 GeneID:5914
(SSTAR profile)
GeneID:19401
(SSTAR profile)
RARA_HUMAN RARA_MOUSE P10276
(TFClass)
P11416
(TFClass)
yes
RARA.H13CORE.2.P.B RARA.H13CORE.2.P.B motif logo (RARA gene, RARA_HUMAN protein) RARA
(GeneCards)
NR1B1 Rara Nr1b1 17 B 2 hvAGGTCAbnnhRhhMn P 1003 Zinc-coordinating DNA-binding domains {2} (TFClass) Nuclear receptors with C4 zinc fingers {2.1} (TFClass) Thyroid hormone receptor-related {2.1.2} (TFClass) RAR (NR1B) {2.1.2.1} (TFClass) TFClass: 2.1.2.1.1 HGNC:9864 MGI:97856 GeneID:5914
(SSTAR profile)
GeneID:19401
(SSTAR profile)
RARA_HUMAN RARA_MOUSE P10276
(TFClass)
P11416
(TFClass)
yes
RARA.H13CORE.3.P.B RARA.H13CORE.3.P.B motif logo (RARA gene, RARA_HUMAN protein) RARA
(GeneCards)
NR1B1 Rara Nr1b1 21 B 3 vdbvvdRAGKTCARRRhSRdb P 944 Zinc-coordinating DNA-binding domains {2} (TFClass) Nuclear receptors with C4 zinc fingers {2.1} (TFClass) Thyroid hormone receptor-related {2.1.2} (TFClass) RAR (NR1B) {2.1.2.1} (TFClass) TFClass: 2.1.2.1.1 HGNC:9864 MGI:97856 GeneID:5914
(SSTAR profile)
GeneID:19401
(SSTAR profile)
RARA_HUMAN RARA_MOUSE P10276
(TFClass)
P11416
(TFClass)
yes
RARB.H13CORE.0.SM.B RARB.H13CORE.0.SM.B motif logo (RARB gene, RARB_HUMAN protein) RARB
(GeneCards)
HAP, NR1B2 Rarb Nr1b2 10 B 0 dRAGGTCAhb S+M 9967 Zinc-coordinating DNA-binding domains {2} (TFClass) Nuclear receptors with C4 zinc fingers {2.1} (TFClass) Thyroid hormone receptor-related {2.1.2} (TFClass) RAR (NR1B) {2.1.2.1} (TFClass) TFClass: 2.1.2.1.2 HGNC:9865 MGI:97857 GeneID:5915
(SSTAR profile)
GeneID:218772
(SSTAR profile)
RARB_HUMAN RARB_MOUSE P10826
(TFClass)
P22605
(TFClass)
yes
RARB.H13CORE.1.P.B RARB.H13CORE.1.P.B motif logo (RARB gene, RARB_HUMAN protein) RARB
(GeneCards)
HAP, NR1B2 Rarb Nr1b2 12 B 1 vWdRGKbCARdR P 1028 Zinc-coordinating DNA-binding domains {2} (TFClass) Nuclear receptors with C4 zinc fingers {2.1} (TFClass) Thyroid hormone receptor-related {2.1.2} (TFClass) RAR (NR1B) {2.1.2.1} (TFClass) TFClass: 2.1.2.1.2 HGNC:9865 MGI:97857 GeneID:5915
(SSTAR profile)
GeneID:218772
(SSTAR profile)
RARB_HUMAN RARB_MOUSE P10826
(TFClass)
P22605
(TFClass)
yes
RARG.H13CORE.0.P.B RARG.H13CORE.0.P.B motif logo (RARG gene, RARG_HUMAN protein) RARG
(GeneCards)
NR1B3 Rarg Nr1b3 18 B 0 bhvAGGTCAvnvhRvYYb P 920 Zinc-coordinating DNA-binding domains {2} (TFClass) Nuclear receptors with C4 zinc fingers {2.1} (TFClass) Thyroid hormone receptor-related {2.1.2} (TFClass) RAR (NR1B) {2.1.2.1} (TFClass) TFClass: 2.1.2.1.3 HGNC:9866 MGI:97858 GeneID:5916
(SSTAR profile)
GeneID:19411
(SSTAR profile)
RARG_HUMAN RARG_MOUSE P13631
(TFClass)
P18911
(TFClass)
yes
RARG.H13CORE.1.PSM.A RARG.H13CORE.1.PSM.A motif logo (RARG gene, RARG_HUMAN protein) RARG
(GeneCards)
NR1B3 Rarg Nr1b3 11 A 1 ndAGGTCAnvn P+S+M 9843 Zinc-coordinating DNA-binding domains {2} (TFClass) Nuclear receptors with C4 zinc fingers {2.1} (TFClass) Thyroid hormone receptor-related {2.1.2} (TFClass) RAR (NR1B) {2.1.2.1} (TFClass) TFClass: 2.1.2.1.3 HGNC:9866 MGI:97858 GeneID:5916
(SSTAR profile)
GeneID:19411
(SSTAR profile)
RARG_HUMAN RARG_MOUSE P13631
(TFClass)
P18911
(TFClass)
yes
RARG.H13CORE.2.SM.B RARG.H13CORE.2.SM.B motif logo (RARG gene, RARG_HUMAN protein) RARG
(GeneCards)
NR1B3 Rarg Nr1b3 17 B 2 nhRAGGTCAhdvvvdbn S+M 9944 Zinc-coordinating DNA-binding domains {2} (TFClass) Nuclear receptors with C4 zinc fingers {2.1} (TFClass) Thyroid hormone receptor-related {2.1.2} (TFClass) RAR (NR1B) {2.1.2.1} (TFClass) TFClass: 2.1.2.1.3 HGNC:9866 MGI:97858 GeneID:5916
(SSTAR profile)
GeneID:19411
(SSTAR profile)
RARG_HUMAN RARG_MOUSE P13631
(TFClass)
P18911
(TFClass)
yes
RARG.H13CORE.3.S.B RARG.H13CORE.3.S.B motif logo (RARG gene, RARG_HUMAN protein) RARG
(GeneCards)
NR1B3 Rarg Nr1b3 17 B 3 vddKbWMWWRAGGTCAh S 2430 Zinc-coordinating DNA-binding domains {2} (TFClass) Nuclear receptors with C4 zinc fingers {2.1} (TFClass) Thyroid hormone receptor-related {2.1.2} (TFClass) RAR (NR1B) {2.1.2.1} (TFClass) TFClass: 2.1.2.1.3 HGNC:9866 MGI:97858 GeneID:5916
(SSTAR profile)
GeneID:19411
(SSTAR profile)
RARG_HUMAN RARG_MOUSE P13631
(TFClass)
P18911
(TFClass)
yes
Supported by RSF grant 20-74-10075.