v13 Core collection, Family {3.1.5}: HD-LIM
Motif Gene (human) Gene synonyms (human) Gene (mouse) Gene synonyms (mouse) Motif length Quality
 Motif subtype Consensus Data sources
 Aligned words TF superclass TF class TF family TF subfamily TFClass ID HGNC MGI EntrezGene (human) EntrezGene (mouse) UniProt ID (human) UniProt ID (mouse) UniProt AC (human) UniProt AC (mouse) GRECO-DB-TF
ISL1.H13CORE.0.PSM.A ISL1
(GeneCards)		 Isl1 12 A 0 nbvbTAATKRvn P+S+M 9875 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) ISL {3.1.5.1} (TFClass) TFClass: 3.1.5.1.1 HGNC:6132 MGI:101791 GeneID:3670
(SSTAR profile)		 GeneID:16392
(SSTAR profile)		 ISL1_HUMAN ISL1_MOUSE P61371
(TFClass)		 P61372
(TFClass)		 yes
ISL2.H13CORE.0.SM.B ISL2
(GeneCards)		 Isl2 11 B 0 nvbTAATTRvn S+M 9713 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) ISL {3.1.5.1} (TFClass) TFClass: 3.1.5.1.2 HGNC:18524 MGI:109156 GeneID:64843
(SSTAR profile)		 GeneID:104360
(SSTAR profile)		 ISL2_HUMAN ISL2_MOUSE Q96A47
(TFClass)		 Q9CXV0
(TFClass)		 yes
LHX1.H13CORE.0.S.C LHX1
(GeneCards)		 LIM-1, LIM1 Lhx1 Lim-1, Lim1 11 C 0 nvbTAATKRnn S 9612 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LHX1-like {3.1.5.2} (TFClass) TFClass: 3.1.5.2.1 HGNC:6593 MGI:99783 GeneID:3975
(SSTAR profile)		 GeneID:16869
(SSTAR profile)		 LHX1_HUMAN LHX1_MOUSE P48742
(TFClass)		 P63006
(TFClass)		 yes
LHX1.H13CORE.1.M.C LHX1
(GeneCards)		 LIM-1, LIM1 Lhx1 Lim-1, Lim1 10 C 1 nSbTAACGMn M 4814 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LHX1-like {3.1.5.2} (TFClass) TFClass: 3.1.5.2.1 HGNC:6593 MGI:99783 GeneID:3975
(SSTAR profile)		 GeneID:16869
(SSTAR profile)		 LHX1_HUMAN LHX1_MOUSE P48742
(TFClass)		 P63006
(TFClass)		 yes
LHX2.H13CORE.0.PS.A LHX2
(GeneCards)		 LH2 Lhx2 9 A 0 hTAATKRSn P+S 976 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LHX2-like {3.1.5.3} (TFClass) TFClass: 3.1.5.3.1 HGNC:6594 MGI:96785 GeneID:9355
(SSTAR profile)		 GeneID:16870
(SSTAR profile)		 LHX2_HUMAN LHX2_MOUSE P50458
(TFClass)		 Q9Z0S2
(TFClass)		 yes
LHX2.H13CORE.1.S.C LHX2
(GeneCards)		 LH2 Lhx2 19 C 1 nhhWWWdnvYTAATTAvnn S 2014 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LHX2-like {3.1.5.3} (TFClass) TFClass: 3.1.5.3.1 HGNC:6594 MGI:96785 GeneID:9355
(SSTAR profile)		 GeneID:16870
(SSTAR profile)		 LHX2_HUMAN LHX2_MOUSE P50458
(TFClass)		 Q9Z0S2
(TFClass)		 yes
LHX3.H13CORE.0.P.B LHX3
(GeneCards)		 Lhx3 Lim-3, Lim3, Plim 10 B 0 MWKYAATTAR P 1001 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LHX3-like {3.1.5.4} (TFClass) TFClass: 3.1.5.4.1 HGNC:6595 MGI:102673 GeneID:8022
(SSTAR profile)		 GeneID:16871
(SSTAR profile)		 LHX3_HUMAN LHX3_MOUSE Q9UBR4
(TFClass)		 P50481
(TFClass)		 yes
LHX4.H13CORE.0.SM.B LHX4
(GeneCards)		 Lhx4 Gsh-4, Gsh4 12 B 0 nbYAATTARbnn S+M 8107 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LHX3-like {3.1.5.4} (TFClass) TFClass: 3.1.5.4.2 HGNC:21734 MGI:101776 GeneID:89884
(SSTAR profile)		 GeneID:16872
(SSTAR profile)		 LHX4_HUMAN LHX4_MOUSE Q969G2
(TFClass)		 P53776
(TFClass)		 yes
LHX5.H13CORE.0.PSM.A LHX5
(GeneCards)		 Lhx5 12 A 0 nnvYTAATTAbn P+S+M 9144 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LHX1-like {3.1.5.2} (TFClass) TFClass: 3.1.5.2.2 HGNC:14216 MGI:107792 GeneID:64211
(SSTAR profile)		 GeneID:16873
(SSTAR profile)		 LHX5_HUMAN LHX5_MOUSE Q9H2C1
(TFClass)		 P61375
(TFClass)		 yes
LHX6.H13CORE.0.P.B LHX6
(GeneCards)		 LHX6.1 Lhx6 Lhx6.1 10 B 0 bYAATCARnn P 481 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LHX6-like {3.1.5.5} (TFClass) TFClass: 3.1.5.5.1 HGNC:21735 MGI:1306803 GeneID:26468
(SSTAR profile)		 GeneID:16874
(SSTAR profile)		 LHX6_HUMAN LHX6_MOUSE Q9UPM6
(TFClass)		 Q9R1R0
(TFClass)		 yes
LHX6.H13CORE.1.S.B LHX6
(GeneCards)		 LHX6.1 Lhx6 Lhx6.1 14 B 1 nnvSTAATTARbbn S 8423 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LHX6-like {3.1.5.5} (TFClass) TFClass: 3.1.5.5.1 HGNC:21735 MGI:1306803 GeneID:26468
(SSTAR profile)		 GeneID:16874
(SSTAR profile)		 LHX6_HUMAN LHX6_MOUSE Q9UPM6
(TFClass)		 Q9R1R0
(TFClass)		 yes
LHX6.H13CORE.2.M.C LHX6
(GeneCards)		 LHX6.1 Lhx6 Lhx6.1 13 C 2 nvvYTAACKAGbn M 1987 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LHX6-like {3.1.5.5} (TFClass) TFClass: 3.1.5.5.1 HGNC:21735 MGI:1306803 GeneID:26468
(SSTAR profile)		 GeneID:16874
(SSTAR profile)		 LHX6_HUMAN LHX6_MOUSE Q9UPM6
(TFClass)		 Q9R1R0
(TFClass)		 yes
LHX8.H13CORE.0.S.B LHX8
(GeneCards)		 Lhx8 Lhx7 13 B 0 nvRYTAATTASnn S 7700 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LHX6-like {3.1.5.5} (TFClass) TFClass: 3.1.5.5.2 HGNC:28838 MGI:1096343 GeneID:431707
(SSTAR profile)		 GeneID:16875
(SSTAR profile)		 LHX8_HUMAN LHX8_MOUSE Q68G74
(TFClass)		 O35652
(TFClass)		 yes
LHX8.H13CORE.1.M.C LHX8
(GeneCards)		 Lhx8 Lhx7 13 C 1 nvCTMGTTARYbn M 1951 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LHX6-like {3.1.5.5} (TFClass) TFClass: 3.1.5.5.2 HGNC:28838 MGI:1096343 GeneID:431707
(SSTAR profile)		 GeneID:16875
(SSTAR profile)		 LHX8_HUMAN LHX8_MOUSE Q68G74
(TFClass)		 O35652
(TFClass)		 yes
LHX9.H13CORE.0.PS.A LHX9
(GeneCards)		 Lhx9 12 A 0 nnvYTAATTASn P+S 6527 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LHX2-like {3.1.5.3} (TFClass) TFClass: 3.1.5.3.2 HGNC:14222 MGI:1316721 GeneID:56956
(SSTAR profile)		 GeneID:16876
(SSTAR profile)		 LHX9_HUMAN LHX9_MOUSE Q9NQ69
(TFClass)		 Q9WUH2
(TFClass)		 yes
LHX9.H13CORE.1.M.B LHX9
(GeneCards)		 Lhx9 12 B 1 nvYTAAYGAKbn M 911 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LHX2-like {3.1.5.3} (TFClass) TFClass: 3.1.5.3.2 HGNC:14222 MGI:1316721 GeneID:56956
(SSTAR profile)		 GeneID:16876
(SSTAR profile)		 LHX9_HUMAN LHX9_MOUSE Q9NQ69
(TFClass)		 Q9WUH2
(TFClass)		 yes
LMX1A.H13CORE.0.SM.B LMX1A
(GeneCards)		 Lmx1a 12 B 0 nnnYTAATTRnn S+M 9172 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LMX {3.1.5.6} (TFClass) TFClass: 3.1.5.6.1 HGNC:6653 MGI:1888519 GeneID:4009
(SSTAR profile)		 GeneID:110648
(SSTAR profile)		 LMX1A_HUMAN LMX1A_MOUSE Q8TE12
(TFClass)		 Q9JKU8
(TFClass)		 yes
LMX1B.H13CORE.0.P.C LMX1B
(GeneCards)		 Lmx1b 8 C 0 YAATdAAR P 1007 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LMX {3.1.5.6} (TFClass) TFClass: 3.1.5.6.2 HGNC:6654 MGI:1100513 GeneID:4010
(SSTAR profile)		 GeneID:16917
(SSTAR profile)		 LMX1B_HUMAN LMX1B_MOUSE O60663
(TFClass)		 O88609
(TFClass)		 yes
LMX1B.H13CORE.1.SM.B LMX1B
(GeneCards)		 Lmx1b 12 B 1 nYTAATTAAWWn S+M 9673 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LMX {3.1.5.6} (TFClass) TFClass: 3.1.5.6.2 HGNC:6654 MGI:1100513 GeneID:4010
(SSTAR profile)		 GeneID:16917
(SSTAR profile)		 LMX1B_HUMAN LMX1B_MOUSE O60663
(TFClass)		 O88609
(TFClass)		 yes
LMX1B.H13CORE.2.S.B LMX1B
(GeneCards)		 Lmx1b 20 B 2 vvYTAATTARYhhhWWWddd S 2258 Helix-turn-helix domains {3} (TFClass) Homeo domain factors {3.1} (TFClass) HD-LIM {3.1.5} (TFClass) LMX {3.1.5.6} (TFClass) TFClass: 3.1.5.6.2 HGNC:6654 MGI:1100513 GeneID:4010
(SSTAR profile)		 GeneID:16917
(SSTAR profile)		 LMX1B_HUMAN LMX1B_MOUSE O60663
(TFClass)		 O88609
(TFClass)		 yes