| Motif | AHRR.H13INVITRO.0.P.D |
| Gene (human) | AHRR (GeneCards) |
| Gene synonyms (human) | BHLHE77, KIAA1234 |
| Gene (mouse) | Ahrr |
| Gene synonyms (mouse) | Kiaa1234 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | AHRR.H13INVITRO.0.P.D |
| Gene (human) | AHRR (GeneCards) |
| Gene synonyms (human) | BHLHE77, KIAA1234 |
| Gene (mouse) | Ahrr |
| Gene synonyms (mouse) | Kiaa1234 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 11 |
| Consensus | bYKCGTGMvWd |
| GC content | 57.78% |
| Information content (bits; total / per base) | 10.099 / 0.918 |
| Data sources | ChIP-Seq |
| Aligned words | 1002 |
| Previous names | AHRR.H12INVITRO.0.P.D |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (5) | 0.887 | 0.909 | 0.824 | 0.85 | 0.828 | 0.86 | 2.96 | 3.136 | 237.056 | 295.481 |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic helix-loop-helix factors (bHLH) {1.2} (TFClass) |
| TF family | PAS {1.2.5} (TFClass) |
| TF subfamily | PAS-AHR {1.2.5.1} (TFClass) |
| TFClass ID | TFClass: 1.2.5.1.2 |
| HGNC | HGNC:346 |
| MGI | MGI:1333776 |
| EntrezGene (human) | GeneID:57491 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:11624 (SSTAR profile) |
| UniProt ID (human) | AHRR_HUMAN |
| UniProt ID (mouse) | AHRR_MOUSE |
| UniProt AC (human) | A9YTQ3 (TFClass) |
| UniProt AC (mouse) | Q3U1U7 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | AHRR.H13INVITRO.0.P.D.pcm |
| PWM | AHRR.H13INVITRO.0.P.D.pwm |
| PFM | AHRR.H13INVITRO.0.P.D.pfm |
| Threshold to P-value map | AHRR.H13INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | AHRR.H13INVITRO.0.P.D_jaspar_format.txt |
| MEME format | AHRR.H13INVITRO.0.P.D_meme_format.meme |
| Transfac format | AHRR.H13INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 73.0 | 142.0 | 271.0 | 516.0 |
| 02 | 117.0 | 132.0 | 71.0 | 682.0 |
| 03 | 30.0 | 97.0 | 748.0 | 127.0 |
| 04 | 15.0 | 950.0 | 5.0 | 32.0 |
| 05 | 88.0 | 13.0 | 896.0 | 5.0 |
| 06 | 4.0 | 1.0 | 0.0 | 997.0 |
| 07 | 0.0 | 0.0 | 963.0 | 39.0 |
| 08 | 245.0 | 622.0 | 5.0 | 130.0 |
| 09 | 166.0 | 425.0 | 323.0 | 88.0 |
| 10 | 648.0 | 36.0 | 122.0 | 196.0 |
| 11 | 292.0 | 159.0 | 388.0 | 163.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.073 | 0.142 | 0.27 | 0.515 |
| 02 | 0.117 | 0.132 | 0.071 | 0.681 |
| 03 | 0.03 | 0.097 | 0.747 | 0.127 |
| 04 | 0.015 | 0.948 | 0.005 | 0.032 |
| 05 | 0.088 | 0.013 | 0.894 | 0.005 |
| 06 | 0.004 | 0.001 | 0.0 | 0.995 |
| 07 | 0.0 | 0.0 | 0.961 | 0.039 |
| 08 | 0.245 | 0.621 | 0.005 | 0.13 |
| 09 | 0.166 | 0.424 | 0.322 | 0.088 |
| 10 | 0.647 | 0.036 | 0.122 | 0.196 |
| 11 | 0.291 | 0.159 | 0.387 | 0.163 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.216 | -0.562 | 0.078 | 0.719 |
| 02 | -0.754 | -0.635 | -1.244 | 0.997 |
| 03 | -2.073 | -0.938 | 1.089 | -0.673 |
| 04 | -2.713 | 1.328 | -3.624 | -2.012 |
| 05 | -1.034 | -2.841 | 1.27 | -3.624 |
| 06 | -3.785 | -4.527 | -4.984 | 1.376 |
| 07 | -4.984 | -4.984 | 1.342 | -1.823 |
| 08 | -0.022 | 0.905 | -3.624 | -0.65 |
| 09 | -0.408 | 0.526 | 0.253 | -1.034 |
| 10 | 0.946 | -1.9 | -0.712 | -0.243 |
| 11 | 0.152 | -0.451 | 0.435 | -0.426 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.802915 |
| 0.0005 | 5.684825 |
| 0.0001 | 7.37524 |