| Motif | ATOH8.H13CORE.0.P.C |
| Gene (human) | ATOH8 (GeneCards) |
| Gene synonyms (human) | ATH6, BHLHA21 |
| Gene (mouse) | Atoh8 |
| Gene synonyms (mouse) | Ath6 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | C |
| Motif | ATOH8.H13CORE.0.P.C |
| Gene (human) | ATOH8 (GeneCards) |
| Gene synonyms (human) | ATH6, BHLHA21 |
| Gene (mouse) | Atoh8 |
| Gene synonyms (mouse) | Ath6 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | C |
| Motif length | 11 |
| Consensus | dvRRCAGMTGb |
| GC content | 59.37% |
| Information content (bits; total / per base) | 10.773 / 0.979 |
| Data sources | ChIP-Seq |
| Aligned words | 1005 |
| Previous names | ATOH8.H12CORE.0.P.C |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (4) | 0.842 | 0.855 | 0.755 | 0.762 | 0.796 | 0.819 | 2.521 | 2.633 | 97.108 | 99.658 |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic helix-loop-helix factors (bHLH) {1.2} (TFClass) |
| TF family | Tal-related {1.2.3} (TFClass) |
| TF subfamily | Neurogenin-ATO {1.2.3.4} (TFClass) |
| TFClass ID | TFClass: 1.2.3.4.10 |
| HGNC | HGNC:24126 |
| MGI | MGI:1918343 |
| EntrezGene (human) | GeneID:84913 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:71093 (SSTAR profile) |
| UniProt ID (human) | ATOH8_HUMAN |
| UniProt ID (mouse) | ATOH8_MOUSE |
| UniProt AC (human) | Q96SQ7 (TFClass) |
| UniProt AC (mouse) | Q99NA2 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | ATOH8.H13CORE.0.P.C.pcm |
| PWM | ATOH8.H13CORE.0.P.C.pwm |
| PFM | ATOH8.H13CORE.0.P.C.pfm |
| Threshold to P-value map | ATOH8.H13CORE.0.P.C.thr |
| Motif in other formats | |
| JASPAR format | ATOH8.H13CORE.0.P.C_jaspar_format.txt |
| MEME format | ATOH8.H13CORE.0.P.C_meme_format.meme |
| Transfac format | ATOH8.H13CORE.0.P.C_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 242.0 | 152.0 | 407.0 | 204.0 |
| 02 | 425.0 | 152.0 | 401.0 | 27.0 |
| 03 | 529.0 | 168.0 | 286.0 | 22.0 |
| 04 | 547.0 | 117.0 | 328.0 | 13.0 |
| 05 | 10.0 | 982.0 | 8.0 | 5.0 |
| 06 | 982.0 | 2.0 | 9.0 | 12.0 |
| 07 | 19.0 | 23.0 | 927.0 | 36.0 |
| 08 | 196.0 | 727.0 | 78.0 | 4.0 |
| 09 | 110.0 | 6.0 | 5.0 | 884.0 |
| 10 | 6.0 | 27.0 | 937.0 | 35.0 |
| 11 | 77.0 | 342.0 | 479.0 | 107.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.241 | 0.151 | 0.405 | 0.203 |
| 02 | 0.423 | 0.151 | 0.399 | 0.027 |
| 03 | 0.526 | 0.167 | 0.285 | 0.022 |
| 04 | 0.544 | 0.116 | 0.326 | 0.013 |
| 05 | 0.01 | 0.977 | 0.008 | 0.005 |
| 06 | 0.977 | 0.002 | 0.009 | 0.012 |
| 07 | 0.019 | 0.023 | 0.922 | 0.036 |
| 08 | 0.195 | 0.723 | 0.078 | 0.004 |
| 09 | 0.109 | 0.006 | 0.005 | 0.88 |
| 10 | 0.006 | 0.027 | 0.932 | 0.035 |
| 11 | 0.077 | 0.34 | 0.477 | 0.106 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.037 | -0.498 | 0.48 | -0.207 |
| 02 | 0.523 | -0.498 | 0.465 | -2.175 |
| 03 | 0.741 | -0.399 | 0.129 | -2.367 |
| 04 | 0.774 | -0.756 | 0.265 | -2.844 |
| 05 | -3.071 | 1.358 | -3.258 | -3.627 |
| 06 | 1.358 | -4.217 | -3.16 | -2.914 |
| 07 | -2.502 | -2.325 | 1.301 | -1.903 |
| 08 | -0.246 | 1.058 | -1.155 | -3.788 |
| 09 | -0.817 | -3.488 | -3.627 | 1.253 |
| 10 | -3.488 | -2.175 | 1.311 | -1.93 |
| 11 | -1.167 | 0.307 | 0.642 | -0.844 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.49617 |
| 0.0005 | 5.434745 |
| 0.0001 | 7.44322 |