| Motif | BHLHA9.H13INVITRO.0.P.D |
| Gene (human) | BHLHA9 (GeneCards) |
| Gene synonyms (human) | BHLHF42 |
| Gene (mouse) | Bhlha9 |
| Gene synonyms (mouse) | Bhlhf42 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | BHLHA9.H13INVITRO.0.P.D |
| Gene (human) | BHLHA9 (GeneCards) |
| Gene synonyms (human) | BHLHF42 |
| Gene (mouse) | Bhlha9 |
| Gene synonyms (mouse) | Bhlhf42 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 10 |
| Consensus | dSCAGSTGKb |
| GC content | 58.36% |
| Information content (bits; total / per base) | 11.728 / 1.173 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| Previous names |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|
| Overall | 2 (2) | 0.924 | 0.932 | 0.835 | 0.839 | 0.842 | 0.888 | 174.614 | 235.658 |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic helix-loop-helix factors (bHLH) {1.2} (TFClass) |
| TF family | Tal-related {1.2.3} (TFClass) |
| TF subfamily | BHLHA9 {1.2.3.5} (TFClass) |
| TFClass ID | TFClass: 1.2.3.5.1 |
| HGNC | HGNC:35126 |
| MGI | MGI:2444198 |
| EntrezGene (human) | GeneID:727857 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:320522 (SSTAR profile) |
| UniProt ID (human) | BHA09_HUMAN |
| UniProt ID (mouse) | BHA09_MOUSE |
| UniProt AC (human) | Q7RTU4 (TFClass) |
| UniProt AC (mouse) | Q5RJB0 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | BHLHA9.H13INVITRO.0.P.D.pcm |
| PWM | BHLHA9.H13INVITRO.0.P.D.pwm |
| PFM | BHLHA9.H13INVITRO.0.P.D.pfm |
| Threshold to P-value map | BHLHA9.H13INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | BHLHA9.H13INVITRO.0.P.D_jaspar_format.txt |
| MEME format | BHLHA9.H13INVITRO.0.P.D_meme_format.meme |
| Transfac format | BHLHA9.H13INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 487.0 | 53.0 | 181.0 | 279.0 |
| 02 | 213.0 | 467.0 | 320.0 | 0.0 |
| 03 | 5.0 | 990.0 | 4.0 | 1.0 |
| 04 | 983.0 | 6.0 | 8.0 | 3.0 |
| 05 | 1.0 | 4.0 | 995.0 | 0.0 |
| 06 | 218.0 | 466.0 | 315.0 | 1.0 |
| 07 | 12.0 | 8.0 | 7.0 | 973.0 |
| 08 | 2.0 | 4.0 | 991.0 | 3.0 |
| 09 | 7.0 | 61.0 | 323.0 | 609.0 |
| 10 | 17.0 | 332.0 | 301.0 | 350.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.487 | 0.053 | 0.181 | 0.279 |
| 02 | 0.213 | 0.467 | 0.32 | 0.0 |
| 03 | 0.005 | 0.99 | 0.004 | 0.001 |
| 04 | 0.983 | 0.006 | 0.008 | 0.003 |
| 05 | 0.001 | 0.004 | 0.995 | 0.0 |
| 06 | 0.218 | 0.466 | 0.315 | 0.001 |
| 07 | 0.012 | 0.008 | 0.007 | 0.973 |
| 08 | 0.002 | 0.004 | 0.991 | 0.003 |
| 09 | 0.007 | 0.061 | 0.323 | 0.609 |
| 10 | 0.017 | 0.332 | 0.301 | 0.35 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.663 | -1.526 | -0.32 | 0.109 |
| 02 | -0.159 | 0.622 | 0.245 | -4.982 |
| 03 | -3.622 | 1.371 | -3.783 | -4.525 |
| 04 | 1.364 | -3.484 | -3.253 | -3.975 |
| 05 | -4.525 | -3.783 | 1.376 | -4.982 |
| 06 | -0.136 | 0.62 | 0.23 | -4.525 |
| 07 | -2.909 | -3.253 | -3.362 | 1.354 |
| 08 | -4.213 | -3.783 | 1.372 | -3.975 |
| 09 | -3.362 | -1.39 | 0.255 | 0.886 |
| 10 | -2.598 | 0.282 | 0.184 | 0.335 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.78534 |
| 0.0005 | 4.523515 |
| 0.0001 | 8.01834 |