| Motif | CR3L4.H13INVIVO.1.S.D |
| Gene (human) | CREB3L4 (GeneCards) |
| Gene synonyms (human) | AIBZIP, CREB4, JAL |
| Gene (mouse) | Creb3l4 |
| Gene synonyms (mouse) | Atce1, Jal, Tisp40 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | D |
| Motif | CR3L4.H13INVIVO.1.S.D |
| Gene (human) | CREB3L4 (GeneCards) |
| Gene synonyms (human) | AIBZIP, CREB4, JAL |
| Gene (mouse) | Creb3l4 |
| Gene synonyms (mouse) | Atce1, Jal, Tisp40 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | D |
| Motif length | 11 |
| Consensus | nhbACGTGGMv |
| GC content | 62.35% |
| Information content (bits; total / per base) | 12.287 / 1.117 |
| Data sources | HT-SELEX |
| Aligned words | 9711 |
| Previous names | CR3L4.H12INVIVO.1.S.D |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 2 experiments | median | 0.991 | 0.986 | 0.974 | 0.964 | 0.914 | 0.9 |
| best | 0.994 | 0.99 | 0.974 | 0.966 | 0.917 | 0.903 | |
| Methyl HT-SELEX, 1 experiments | median | 0.994 | 0.99 | 0.974 | 0.966 | 0.911 | 0.897 |
| best | 0.994 | 0.99 | 0.974 | 0.966 | 0.911 | 0.897 | |
| Non-Methyl HT-SELEX, 1 experiments | median | 0.989 | 0.982 | 0.974 | 0.963 | 0.917 | 0.903 |
| best | 0.989 | 0.982 | 0.974 | 0.963 | 0.917 | 0.903 | |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic leucine zipper factors (bZIP) {1.1} (TFClass) |
| TF family | CREB-related {1.1.7} (TFClass) |
| TF subfamily | CREB3-like {1.1.7.2} (TFClass) |
| TFClass ID | TFClass: 1.1.7.2.5 |
| HGNC | HGNC:18854 |
| MGI | MGI:1916603 |
| EntrezGene (human) | GeneID:148327 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:78284 (SSTAR profile) |
| UniProt ID (human) | CR3L4_HUMAN |
| UniProt ID (mouse) | CR3L4_MOUSE |
| UniProt AC (human) | Q8TEY5 (TFClass) |
| UniProt AC (mouse) | Q9D2A5 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 1 |
| Methyl-HT-SELEX | 1 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | CR3L4.H13INVIVO.1.S.D.pcm |
| PWM | CR3L4.H13INVIVO.1.S.D.pwm |
| PFM | CR3L4.H13INVIVO.1.S.D.pfm |
| Threshold to P-value map | CR3L4.H13INVIVO.1.S.D.thr |
| Motif in other formats | |
| JASPAR format | CR3L4.H13INVIVO.1.S.D_jaspar_format.txt |
| MEME format | CR3L4.H13INVIVO.1.S.D_meme_format.meme |
| Transfac format | CR3L4.H13INVIVO.1.S.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2487.75 | 2008.75 | 3578.75 | 1635.75 |
| 02 | 2141.25 | 2782.25 | 1109.25 | 3678.25 |
| 03 | 817.0 | 4273.0 | 3345.0 | 1276.0 |
| 04 | 9385.0 | 8.0 | 298.0 | 20.0 |
| 05 | 1.0 | 9702.0 | 4.0 | 4.0 |
| 06 | 0.0 | 0.0 | 9711.0 | 0.0 |
| 07 | 1.0 | 0.0 | 0.0 | 9710.0 |
| 08 | 13.0 | 5.0 | 9681.0 | 12.0 |
| 09 | 196.0 | 99.0 | 8539.0 | 877.0 |
| 10 | 1918.5 | 6644.5 | 412.5 | 735.5 |
| 11 | 3803.5 | 1807.5 | 2589.5 | 1510.5 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.256 | 0.207 | 0.369 | 0.168 |
| 02 | 0.22 | 0.287 | 0.114 | 0.379 |
| 03 | 0.084 | 0.44 | 0.344 | 0.131 |
| 04 | 0.966 | 0.001 | 0.031 | 0.002 |
| 05 | 0.0 | 0.999 | 0.0 | 0.0 |
| 06 | 0.0 | 0.0 | 1.0 | 0.0 |
| 07 | 0.0 | 0.0 | 0.0 | 1.0 |
| 08 | 0.001 | 0.001 | 0.997 | 0.001 |
| 09 | 0.02 | 0.01 | 0.879 | 0.09 |
| 10 | 0.198 | 0.684 | 0.042 | 0.076 |
| 11 | 0.392 | 0.186 | 0.267 | 0.156 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.024 | -0.189 | 0.388 | -0.394 |
| 02 | -0.125 | 0.136 | -0.782 | 0.415 |
| 03 | -1.087 | 0.565 | 0.32 | -0.642 |
| 04 | 1.351 | -5.464 | -2.091 | -4.691 |
| 05 | -6.603 | 1.385 | -5.956 | -5.956 |
| 06 | -6.965 | -6.965 | 1.386 | -6.965 |
| 07 | -6.603 | -6.965 | -6.965 | 1.385 |
| 08 | -5.068 | -5.808 | 1.382 | -5.136 |
| 09 | -2.506 | -3.178 | 1.257 | -1.017 |
| 10 | -0.235 | 1.006 | -1.768 | -1.192 |
| 11 | 0.449 | -0.295 | 0.064 | -0.474 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.00386 |
| 0.0005 | 4.72497 |
| 0.0001 | 7.6056 |