| Motif | DACH2.H13INVIVO.0.S.D |
| Gene (human) | DACH2 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Dach2 |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | DACH2.H13INVIVO.0.S.D |
| Gene (human) | DACH2 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Dach2 |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 12 |
| Consensus | ndKKMCvAWTGn |
| GC content | 43.28% |
| Information content (bits; total / per base) | 10.028 / 0.836 |
| Data sources | HT-SELEX |
| Aligned words | 808 |
| Previous names |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| overall, 2 experiments | median | 0.776 | 0.738 | 0.678 | 0.657 | 0.601 | 0.6 |
| best | 0.834 | 0.792 | 0.72 | 0.696 | 0.626 | 0.626 | |
| IVT, 1 experiments | median | 0.834 | 0.792 | 0.72 | 0.696 | 0.626 | 0.626 |
| best | 0.834 | 0.792 | 0.72 | 0.696 | 0.626 | 0.626 | |
| GFPIVT, 1 experiments | median | 0.717 | 0.684 | 0.635 | 0.617 | 0.576 | 0.574 |
| best | 0.717 | 0.684 | 0.635 | 0.617 | 0.576 | 0.574 | |
| TF superclass | Yet undefined DNA-binding domains {0} (TFClass) |
| TF class | Uncharacterized {0.0} (TFClass) |
| TF family | Unannotated {0.0.9} (TFClass) |
| TF subfamily | DACH {0.0.9.1} (TFClass) |
| TFClass ID | TFClass: 0.0.9.1.2 |
| HGNC | |
| MGI | |
| EntrezGene (human) | |
| EntrezGene (mouse) | |
| UniProt ID (human) | DACH2_HUMAN |
| UniProt ID (mouse) | DACH2_MOUSE |
| UniProt AC (human) | Q96NX9 (TFClass) |
| UniProt AC (mouse) | Q925Q8 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 2 overall: 0 Lysate, 1 IVT, 1 GFPIVT |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | DACH2.H13INVIVO.0.S.D.pcm |
| PWM | DACH2.H13INVIVO.0.S.D.pwm |
| PFM | DACH2.H13INVIVO.0.S.D.pfm |
| Threshold to P-value map | DACH2.H13INVIVO.0.S.D.thr |
| Motif in other formats | |
| JASPAR format | DACH2.H13INVIVO.0.S.D_jaspar_format.txt |
| MEME format | DACH2.H13INVIVO.0.S.D_meme_format.meme |
| Transfac format | DACH2.H13INVIVO.0.S.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 289.25 | 227.25 | 129.25 | 162.25 |
| 02 | 453.0 | 95.0 | 143.0 | 117.0 |
| 03 | 23.0 | 68.0 | 222.0 | 495.0 |
| 04 | 20.0 | 19.0 | 465.0 | 304.0 |
| 05 | 509.0 | 231.0 | 46.0 | 22.0 |
| 06 | 0.0 | 743.0 | 62.0 | 3.0 |
| 07 | 210.0 | 129.0 | 394.0 | 75.0 |
| 08 | 785.0 | 0.0 | 1.0 | 22.0 |
| 09 | 272.0 | 22.0 | 0.0 | 514.0 |
| 10 | 1.0 | 3.0 | 10.0 | 794.0 |
| 11 | 33.0 | 82.0 | 677.0 | 16.0 |
| 12 | 141.0 | 260.0 | 168.0 | 239.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.358 | 0.281 | 0.16 | 0.201 |
| 02 | 0.561 | 0.118 | 0.177 | 0.145 |
| 03 | 0.028 | 0.084 | 0.275 | 0.613 |
| 04 | 0.025 | 0.024 | 0.575 | 0.376 |
| 05 | 0.63 | 0.286 | 0.057 | 0.027 |
| 06 | 0.0 | 0.92 | 0.077 | 0.004 |
| 07 | 0.26 | 0.16 | 0.488 | 0.093 |
| 08 | 0.972 | 0.0 | 0.001 | 0.027 |
| 09 | 0.337 | 0.027 | 0.0 | 0.636 |
| 10 | 0.001 | 0.004 | 0.012 | 0.983 |
| 11 | 0.041 | 0.101 | 0.838 | 0.02 |
| 12 | 0.175 | 0.322 | 0.208 | 0.296 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.357 | 0.117 | -0.442 | -0.217 |
| 02 | 0.803 | -0.745 | -0.342 | -0.54 |
| 03 | -2.111 | -1.073 | 0.094 | 0.891 |
| 04 | -2.24 | -2.288 | 0.829 | 0.406 |
| 05 | 0.919 | 0.133 | -1.452 | -2.152 |
| 06 | -4.802 | 1.296 | -1.163 | -3.775 |
| 07 | 0.039 | -0.444 | 0.664 | -0.977 |
| 08 | 1.351 | -4.802 | -4.333 | -2.152 |
| 09 | 0.295 | -2.152 | -4.802 | 0.929 |
| 10 | -4.333 | -3.775 | -2.859 | 1.363 |
| 11 | -1.771 | -0.89 | 1.204 | -2.444 |
| 12 | -0.356 | 0.251 | -0.183 | 0.167 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.811965 |
| 0.0005 | 5.69219 |
| 0.0001 | 7.42986 |