MotifFIZ1.H13INVIVO.0.PSGI.A
Gene (human)FIZ1
(GeneCards)
Gene synonyms (human)ZNF798
Gene (mouse)Fiz1
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
A
Motif length21
ConsensusdGnbYYGRGTTCRAATYYbRv
GC content57.04%
Information content (bits; total / per base)17.613 / 0.839
Data sourcesChIP-Seq + HT-SELEX + Genomic HT-SELEX + SMiLe-Seq
Aligned words500
Previous names

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best Centrality, median Centrality, best
Overall 2 (2) 0.961 0.969 0.929 0.943 0.933 0.942 209.716 241.276

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Lysate, 2 experiments median 0.929 0.933 0.717 0.75 0.611 0.647
best 0.984 0.983 0.773 0.8 0.64 0.678

Genomic HT-SELEX benchmarking Centrality pseudo-auROC auROC auPR
Lysate, 2 experiments median 716.635 0.975 0.978 0.972
best 1033.032 0.984 0.98 0.973

SMiLE-Seq benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 1 experiments median 0.997 0.996 0.971 0.966 0.839 0.848
best 0.997 0.996 0.971 0.966 0.839 0.848
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyUnclassified {2.3.4.0} (TFClass)
TFClass IDTFClass: 2.3.4.0.38
HGNCHGNC:25917
MGIMGI:1344336
EntrezGene (human)GeneID:84922
(SSTAR profile)
EntrezGene (mouse)GeneID:23877
(SSTAR profile)
UniProt ID (human)FIZ1_HUMAN
UniProt ID (mouse)FIZ1_MOUSE
UniProt AC (human)Q96SL8
(TFClass)
UniProt AC (mouse)Q9WTJ4
(TFClass)
GRECO-DB-TF
no
ChIP-Seq 2 human, 0 mouse
HT-SELEX 2 overall: 2 Lysate, 0 IVT, 0 GFPIVT
Genomic HT-SELEX 2 overall: 2 Lysate, 0 IVT, 0 GFPIVT
SMiLE-Seq 1
PBM 0
PCM
ACGT
01167.027.0244.062.0
0242.026.0412.020.0
03152.0106.0138.0104.0
0437.0285.068.0110.0
0533.0336.064.067.0
0633.0126.028.0313.0
0745.022.0420.013.0
08122.011.0350.017.0
0956.01.0438.05.0
105.07.03.0485.0
114.01.0109.0386.0
123.0460.07.030.0
13171.039.0260.030.0
14444.01.051.04.0
15369.02.0124.05.0
1630.012.041.0417.0
1711.0346.039.0104.0
1828.0385.034.053.0
1948.0156.054.0242.0
2094.057.0319.030.0
2183.0222.0158.037.0
PFM
ACGT
010.3340.0540.4880.124
020.0840.0520.8240.04
030.3040.2120.2760.208
040.0740.570.1360.22
050.0660.6720.1280.134
060.0660.2520.0560.626
070.090.0440.840.026
080.2440.0220.70.034
090.1120.0020.8760.01
100.010.0140.0060.97
110.0080.0020.2180.772
120.0060.920.0140.06
130.3420.0780.520.06
140.8880.0020.1020.008
150.7380.0040.2480.01
160.060.0240.0820.834
170.0220.6920.0780.208
180.0560.770.0680.106
190.0960.3120.1080.484
200.1880.1140.6380.06
210.1660.4440.3160.074
PWM
ACGT
010.287-1.4890.663-0.689
02-1.067-1.5251.184-1.77
030.193-0.1630.098-0.181
04-1.1890.817-0.599-0.126
05-1.2980.981-0.658-0.613
06-1.2980.008-1.4540.91
07-1.0-1.6811.203-2.163
08-0.024-2.3111.022-1.92
09-0.788-3.9031.245-2.961
10-2.961-2.694-3.3251.347
11-3.126-3.903-0.1351.119
12-3.3251.294-2.694-1.389
130.31-1.1380.726-1.389
141.259-3.903-0.879-3.126
151.074-3.573-0.008-2.961
16-1.389-2.234-1.091.196
17-2.3111.01-1.138-0.181
18-1.4541.117-1.27-0.841
19-0.9380.219-0.8230.655
20-0.281-0.7710.929-1.389
21-0.4030.5690.232-1.189
Standard thresholds
P-value Threshold
0.001 2.35016
0.0005 3.53026
0.0001 6.02266