| Motif | FOXK2.H13RSNP.0.P.B |
| Gene (human) | FOXK2 (GeneCards) |
| Gene synonyms (human) | ILF, ILF1 |
| Gene (mouse) | Foxk2 |
| Gene synonyms (mouse) | Ilf1 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | FOXK2.H13RSNP.0.P.B |
| Gene (human) | FOXK2 (GeneCards) |
| Gene synonyms (human) | ILF, ILF1 |
| Gene (mouse) | Foxk2 |
| Gene synonyms (mouse) | Ilf1 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 7 |
| Consensus | TGTTKhY |
| GC content | 35.55% |
| Information content (bits; total / per base) | 7.122 / 1.017 |
| Data sources | ChIP-Seq |
| Aligned words | 993 |
| Previous names | FOXK2.H12RSNP.0.P.B |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 5 (25) | 0.721 | 0.861 | 0.638 | 0.768 | 0.769 | 0.875 | 2.225 | 2.885 | 135.854 | 377.071 |
| rSNP benchmarking, SNP-SELEX | auROC | auPRC | Pearson r | Kendall tau |
|---|---|---|---|---|
| batch 2 | 0.679 | 0.145 | 0.675 | 0.487 |
| TF superclass | Helix-turn-helix domains {3} (TFClass) |
| TF class | Fork head/winged helix factors {3.3} (TFClass) |
| TF family | FOX {3.3.1} (TFClass) |
| TF subfamily | FOXK {3.3.1.11} (TFClass) |
| TFClass ID | TFClass: 3.3.1.11.2 |
| HGNC | HGNC:6036 |
| MGI | MGI:1916087 |
| EntrezGene (human) | GeneID:3607 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:68837 (SSTAR profile) |
| UniProt ID (human) | FOXK2_HUMAN |
| UniProt ID (mouse) | FOXK2_MOUSE |
| UniProt AC (human) | Q01167 (TFClass) |
| UniProt AC (mouse) | Q3UCQ1 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 5 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | FOXK2.H13RSNP.0.P.B.pcm |
| PWM | FOXK2.H13RSNP.0.P.B.pwm |
| PFM | FOXK2.H13RSNP.0.P.B.pfm |
| Threshold to P-value map | FOXK2.H13RSNP.0.P.B.thr |
| Motif in other formats | |
| JASPAR format | FOXK2.H13RSNP.0.P.B_jaspar_format.txt |
| MEME format | FOXK2.H13RSNP.0.P.B_meme_format.meme |
| Transfac format | FOXK2.H13RSNP.0.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 31.0 | 16.0 | 25.0 | 921.0 |
| 02 | 102.0 | 47.0 | 837.0 | 7.0 |
| 03 | 20.0 | 46.0 | 29.0 | 898.0 |
| 04 | 5.0 | 41.0 | 136.0 | 811.0 |
| 05 | 15.0 | 36.0 | 239.0 | 703.0 |
| 06 | 534.0 | 252.0 | 84.0 | 123.0 |
| 07 | 49.0 | 631.0 | 52.0 | 261.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.031 | 0.016 | 0.025 | 0.927 |
| 02 | 0.103 | 0.047 | 0.843 | 0.007 |
| 03 | 0.02 | 0.046 | 0.029 | 0.904 |
| 04 | 0.005 | 0.041 | 0.137 | 0.817 |
| 05 | 0.015 | 0.036 | 0.241 | 0.708 |
| 06 | 0.538 | 0.254 | 0.085 | 0.124 |
| 07 | 0.049 | 0.635 | 0.052 | 0.263 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -2.033 | -2.646 | -2.236 | 1.306 |
| 02 | -0.88 | -1.635 | 1.211 | -3.355 |
| 03 | -2.443 | -1.656 | -2.096 | 1.281 |
| 04 | -3.616 | -1.767 | -0.596 | 1.179 |
| 05 | -2.704 | -1.891 | -0.038 | 1.036 |
| 06 | 0.762 | 0.015 | -1.07 | -0.695 |
| 07 | -1.595 | 0.929 | -1.537 | 0.05 |
| P-value | Threshold |
|---|---|
| 0.001 | 5.03514 |
| 0.0005 | 5.817775 |
| 0.0001 | 6.934795 |