| Motif | FOXO6.H13RSNP.0.S.B |
| Gene (human) | FOXO6 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Foxo6 |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | FOXO6.H13RSNP.0.S.B |
| Gene (human) | FOXO6 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Foxo6 |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 12 |
| Consensus | nbdTGTTTACdn |
| GC content | 34.54% |
| Information content (bits; total / per base) | 13.457 / 1.121 |
| Data sources | HT-SELEX |
| Aligned words | 2345 |
| Previous names | FOXO6.H12RSNP.0.S.B |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 2 experiments | median | 0.951 | 0.933 | 0.83 | 0.819 | 0.688 | 0.704 |
| best | 0.967 | 0.954 | 0.853 | 0.844 | 0.699 | 0.72 | |
| rSNP benchmarking, SNP-SELEX | auROC | auPRC | Pearson r | Kendall tau |
|---|---|---|---|---|
| batch 2 | 0.604 | 0.274 | 0.506 | 0.398 |
| TF superclass | Helix-turn-helix domains {3} (TFClass) |
| TF class | Fork head/winged helix factors {3.3} (TFClass) |
| TF family | FOX {3.3.1} (TFClass) |
| TF subfamily | FOXO {3.3.1.15} (TFClass) |
| TFClass ID | TFClass: 3.3.1.15.5 |
| HGNC | HGNC:24814 |
| MGI | MGI:2676586 |
| EntrezGene (human) | |
| EntrezGene (mouse) | GeneID:329934 (SSTAR profile) |
| UniProt ID (human) | FOXO6_HUMAN |
| UniProt ID (mouse) | FOXO6_MOUSE |
| UniProt AC (human) | A8MYZ6 (TFClass) |
| UniProt AC (mouse) | Q70KY4 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 2 |
| Methyl-HT-SELEX | 0 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | FOXO6.H13RSNP.0.S.B.pcm |
| PWM | FOXO6.H13RSNP.0.S.B.pwm |
| PFM | FOXO6.H13RSNP.0.S.B.pfm |
| Threshold to P-value map | FOXO6.H13RSNP.0.S.B.thr |
| Motif in other formats | |
| JASPAR format | FOXO6.H13RSNP.0.S.B_jaspar_format.txt |
| MEME format | FOXO6.H13RSNP.0.S.B_meme_format.meme |
| Transfac format | FOXO6.H13RSNP.0.S.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 634.25 | 479.25 | 431.25 | 800.25 |
| 02 | 309.5 | 892.5 | 742.5 | 400.5 |
| 03 | 686.0 | 174.0 | 345.0 | 1140.0 |
| 04 | 6.0 | 9.0 | 3.0 | 2327.0 |
| 05 | 12.0 | 0.0 | 2333.0 | 0.0 |
| 06 | 0.0 | 1.0 | 0.0 | 2344.0 |
| 07 | 0.0 | 0.0 | 0.0 | 2345.0 |
| 08 | 0.0 | 0.0 | 36.0 | 2309.0 |
| 09 | 2298.0 | 10.0 | 3.0 | 34.0 |
| 10 | 7.0 | 1946.0 | 36.0 | 356.0 |
| 11 | 509.25 | 435.25 | 958.25 | 442.25 |
| 12 | 566.75 | 488.75 | 394.75 | 894.75 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.27 | 0.204 | 0.184 | 0.341 |
| 02 | 0.132 | 0.381 | 0.317 | 0.171 |
| 03 | 0.293 | 0.074 | 0.147 | 0.486 |
| 04 | 0.003 | 0.004 | 0.001 | 0.992 |
| 05 | 0.005 | 0.0 | 0.995 | 0.0 |
| 06 | 0.0 | 0.0 | 0.0 | 1.0 |
| 07 | 0.0 | 0.0 | 0.0 | 1.0 |
| 08 | 0.0 | 0.0 | 0.015 | 0.985 |
| 09 | 0.98 | 0.004 | 0.001 | 0.014 |
| 10 | 0.003 | 0.83 | 0.015 | 0.152 |
| 11 | 0.217 | 0.186 | 0.409 | 0.189 |
| 12 | 0.242 | 0.208 | 0.168 | 0.382 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.078 | -0.201 | -0.306 | 0.31 |
| 02 | -0.636 | 0.419 | 0.236 | -0.38 |
| 03 | 0.157 | -1.207 | -0.528 | 0.663 |
| 04 | -4.305 | -3.985 | -4.78 | 1.376 |
| 05 | -3.742 | -5.714 | 1.379 | -5.714 |
| 06 | -5.714 | -5.299 | -5.714 | 1.383 |
| 07 | -5.714 | -5.714 | -5.714 | 1.384 |
| 08 | -5.714 | -5.714 | -2.741 | 1.368 |
| 09 | 1.364 | -3.897 | -4.78 | -2.795 |
| 10 | -4.187 | 1.197 | -2.741 | -0.497 |
| 11 | -0.14 | -0.297 | 0.49 | -0.281 |
| 12 | -0.034 | -0.181 | -0.394 | 0.422 |
| P-value | Threshold |
|---|---|
| 0.001 | 2.543085 |
| 0.0005 | 3.77028 |
| 0.0001 | 6.999665 |