| Motif | KLF16.H13CORE.1.P.B |
| Gene (human) | KLF16 (GeneCards) |
| Gene synonyms (human) | BTEB4, NSLP2 |
| Gene (mouse) | Klf16 |
| Gene synonyms (mouse) | Bteb4, Drrf |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | B |
| Motif | KLF16.H13CORE.1.P.B |
| Gene (human) | KLF16 (GeneCards) |
| Gene synonyms (human) | BTEB4, NSLP2 |
| Gene (mouse) | Klf16 |
| Gene synonyms (mouse) | Bteb4, Drrf |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | B |
| Motif length | 23 |
| Consensus | SvvRvvRRRGGMRGRGMnSRvRS |
| GC content | 76.31% |
| Information content (bits; total / per base) | 15.502 / 0.674 |
| Data sources | ChIP-Seq |
| Aligned words | 999 |
| Previous names | KLF16.H12CORE.1.P.B |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (13) | 0.635 | 0.682 | 0.433 | 0.449 | 0.681 | 0.834 | 2.459 | 3.335 | 0.149 | 2.0 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 3 experiments | median | 0.582 | 0.547 | 0.568 | 0.54 | 0.55 | 0.532 |
| best | 0.603 | 0.558 | 0.586 | 0.551 | 0.563 | 0.541 | |
| Methyl HT-SELEX, 1 experiments | median | 0.582 | 0.547 | 0.568 | 0.54 | 0.55 | 0.532 |
| best | 0.582 | 0.547 | 0.568 | 0.54 | 0.55 | 0.532 | |
| Non-Methyl HT-SELEX, 2 experiments | median | 0.558 | 0.534 | 0.548 | 0.529 | 0.534 | 0.522 |
| best | 0.603 | 0.558 | 0.586 | 0.551 | 0.563 | 0.541 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | Three-zinc finger Kruppel-related {2.3.1} (TFClass) |
| TF subfamily | Kr-like {2.3.1.2} (TFClass) |
| TFClass ID | TFClass: 2.3.1.2.16 |
| HGNC | HGNC:16857 |
| MGI | MGI:2153049 |
| EntrezGene (human) | GeneID:83855 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:118445 (SSTAR profile) |
| UniProt ID (human) | KLF16_HUMAN |
| UniProt ID (mouse) | KLF16_MOUSE |
| UniProt AC (human) | Q9BXK1 (TFClass) |
| UniProt AC (mouse) | P58334 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 2 |
| Methyl-HT-SELEX | 1 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | KLF16.H13CORE.1.P.B.pcm |
| PWM | KLF16.H13CORE.1.P.B.pwm |
| PFM | KLF16.H13CORE.1.P.B.pfm |
| Threshold to P-value map | KLF16.H13CORE.1.P.B.thr |
| Motif in other formats | |
| JASPAR format | KLF16.H13CORE.1.P.B_jaspar_format.txt |
| MEME format | KLF16.H13CORE.1.P.B_meme_format.meme |
| Transfac format | KLF16.H13CORE.1.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 137.0 | 247.0 | 566.0 | 49.0 |
| 02 | 179.0 | 263.0 | 515.0 | 42.0 |
| 03 | 198.0 | 183.0 | 503.0 | 115.0 |
| 04 | 113.0 | 90.0 | 718.0 | 78.0 |
| 05 | 163.0 | 244.0 | 540.0 | 52.0 |
| 06 | 389.0 | 183.0 | 294.0 | 133.0 |
| 07 | 208.0 | 79.0 | 658.0 | 54.0 |
| 08 | 129.0 | 73.0 | 773.0 | 24.0 |
| 09 | 313.0 | 42.0 | 598.0 | 46.0 |
| 10 | 43.0 | 9.0 | 929.0 | 18.0 |
| 11 | 20.0 | 52.0 | 916.0 | 11.0 |
| 12 | 265.0 | 646.0 | 11.0 | 77.0 |
| 13 | 140.0 | 25.0 | 782.0 | 52.0 |
| 14 | 39.0 | 10.0 | 917.0 | 33.0 |
| 15 | 227.0 | 33.0 | 702.0 | 37.0 |
| 16 | 86.0 | 32.0 | 850.0 | 31.0 |
| 17 | 249.0 | 573.0 | 148.0 | 29.0 |
| 18 | 219.0 | 288.0 | 306.0 | 186.0 |
| 19 | 122.0 | 153.0 | 606.0 | 118.0 |
| 20 | 192.0 | 118.0 | 654.0 | 35.0 |
| 21 | 245.0 | 224.0 | 459.0 | 71.0 |
| 22 | 262.0 | 90.0 | 603.0 | 44.0 |
| 23 | 114.0 | 159.0 | 670.0 | 56.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.137 | 0.247 | 0.567 | 0.049 |
| 02 | 0.179 | 0.263 | 0.516 | 0.042 |
| 03 | 0.198 | 0.183 | 0.504 | 0.115 |
| 04 | 0.113 | 0.09 | 0.719 | 0.078 |
| 05 | 0.163 | 0.244 | 0.541 | 0.052 |
| 06 | 0.389 | 0.183 | 0.294 | 0.133 |
| 07 | 0.208 | 0.079 | 0.659 | 0.054 |
| 08 | 0.129 | 0.073 | 0.774 | 0.024 |
| 09 | 0.313 | 0.042 | 0.599 | 0.046 |
| 10 | 0.043 | 0.009 | 0.93 | 0.018 |
| 11 | 0.02 | 0.052 | 0.917 | 0.011 |
| 12 | 0.265 | 0.647 | 0.011 | 0.077 |
| 13 | 0.14 | 0.025 | 0.783 | 0.052 |
| 14 | 0.039 | 0.01 | 0.918 | 0.033 |
| 15 | 0.227 | 0.033 | 0.703 | 0.037 |
| 16 | 0.086 | 0.032 | 0.851 | 0.031 |
| 17 | 0.249 | 0.574 | 0.148 | 0.029 |
| 18 | 0.219 | 0.288 | 0.306 | 0.186 |
| 19 | 0.122 | 0.153 | 0.607 | 0.118 |
| 20 | 0.192 | 0.118 | 0.655 | 0.035 |
| 21 | 0.245 | 0.224 | 0.459 | 0.071 |
| 22 | 0.262 | 0.09 | 0.604 | 0.044 |
| 23 | 0.114 | 0.159 | 0.671 | 0.056 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.595 | -0.011 | 0.814 | -1.601 |
| 02 | -0.33 | 0.051 | 0.72 | -1.749 |
| 03 | -0.23 | -0.308 | 0.697 | -0.768 |
| 04 | -0.785 | -1.009 | 1.052 | -1.149 |
| 05 | -0.423 | -0.023 | 0.767 | -1.543 |
| 06 | 0.441 | -0.308 | 0.162 | -0.624 |
| 07 | -0.182 | -1.136 | 0.964 | -1.507 |
| 08 | -0.654 | -1.214 | 1.125 | -2.28 |
| 09 | 0.224 | -1.749 | 0.869 | -1.662 |
| 10 | -1.727 | -3.155 | 1.309 | -2.545 |
| 11 | -2.449 | -1.543 | 1.295 | -2.984 |
| 12 | 0.059 | 0.946 | -2.984 | -1.161 |
| 13 | -0.573 | -2.242 | 1.137 | -1.543 |
| 14 | -1.82 | -3.065 | 1.296 | -1.98 |
| 15 | -0.095 | -1.98 | 1.029 | -1.871 |
| 16 | -1.053 | -2.009 | 1.22 | -2.039 |
| 17 | -0.003 | 0.827 | -0.519 | -2.102 |
| 18 | -0.13 | 0.142 | 0.202 | -0.292 |
| 19 | -0.709 | -0.486 | 0.882 | -0.742 |
| 20 | -0.261 | -0.742 | 0.958 | -1.924 |
| 21 | -0.019 | -0.108 | 0.605 | -1.241 |
| 22 | 0.048 | -1.009 | 0.877 | -1.705 |
| 23 | -0.776 | -0.448 | 0.983 | -1.472 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.24701 |
| 0.0005 | 4.29121 |
| 0.0001 | 6.50751 |