| Motif | STAT3.H13RSNP.0.P.B |
| Gene (human) | STAT3 (GeneCards) |
| Gene synonyms (human) | APRF |
| Gene (mouse) | Stat3 |
| Gene synonyms (mouse) | Aprf |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | STAT3.H13RSNP.0.P.B |
| Gene (human) | STAT3 (GeneCards) |
| Gene synonyms (human) | APRF |
| Gene (mouse) | Stat3 |
| Gene synonyms (mouse) | Aprf |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 11 |
| Consensus | hTTCCCRKMAv |
| GC content | 45.92% |
| Information content (bits; total / per base) | 10.989 / 0.999 |
| Data sources | ChIP-Seq |
| Aligned words | 1003 |
| Previous names | STAT3.H12RSNP.0.P.B |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 29 (182) | 0.839 | 0.947 | 0.755 | 0.914 | 0.839 | 0.938 | 3.022 | 4.102 | 175.563 | 436.284 |
| Mouse | 48 (289) | 0.841 | 0.94 | 0.727 | 0.89 | 0.84 | 0.943 | 2.746 | 4.076 | 176.367 | 422.658 |
| rSNP benchmarking, ADASTRA | odds-ratio | -log-Fisher's P | Pearson r | Kendall tau |
|---|---|---|---|---|
| # | 17.203 | 6.603 | 0.263 | 0.2 |
| TF superclass | Immunoglobulin fold {6} (TFClass) |
| TF class | STAT domain factors {6.2} (TFClass) |
| TF family | STAT {6.2.1} (TFClass) |
| TF subfamily | {6.2.1.0} (TFClass) |
| TFClass ID | TFClass: 6.2.1.0.3 |
| HGNC | HGNC:11364 |
| MGI | MGI:103038 |
| EntrezGene (human) | GeneID:6774 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:20848 (SSTAR profile) |
| UniProt ID (human) | STAT3_HUMAN |
| UniProt ID (mouse) | STAT3_MOUSE |
| UniProt AC (human) | P40763 (TFClass) |
| UniProt AC (mouse) | P42227 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 29 human, 48 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| Genomic HT-SELEX | 0 overall: 0 Lysate, 0 IVT, 0 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | STAT3.H13RSNP.0.P.B.pcm |
| PWM | STAT3.H13RSNP.0.P.B.pwm |
| PFM | STAT3.H13RSNP.0.P.B.pfm |
| Threshold to P-value map | STAT3.H13RSNP.0.P.B.thr |
| Motif in other formats | |
| JASPAR format | STAT3.H13RSNP.0.P.B_jaspar_format.txt |
| MEME format | STAT3.H13RSNP.0.P.B_meme_format.meme |
| Transfac format | STAT3.H13RSNP.0.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 161.0 | 335.0 | 134.0 | 373.0 |
| 02 | 7.0 | 13.0 | 8.0 | 975.0 |
| 03 | 14.0 | 8.0 | 55.0 | 926.0 |
| 04 | 141.0 | 818.0 | 10.0 | 34.0 |
| 05 | 11.0 | 779.0 | 6.0 | 207.0 |
| 06 | 0.0 | 629.0 | 0.0 | 374.0 |
| 07 | 276.0 | 27.0 | 679.0 | 21.0 |
| 08 | 33.0 | 34.0 | 745.0 | 191.0 |
| 09 | 733.0 | 232.0 | 5.0 | 33.0 |
| 10 | 901.0 | 39.0 | 36.0 | 27.0 |
| 11 | 409.0 | 158.0 | 316.0 | 120.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.161 | 0.334 | 0.134 | 0.372 |
| 02 | 0.007 | 0.013 | 0.008 | 0.972 |
| 03 | 0.014 | 0.008 | 0.055 | 0.923 |
| 04 | 0.141 | 0.816 | 0.01 | 0.034 |
| 05 | 0.011 | 0.777 | 0.006 | 0.206 |
| 06 | 0.0 | 0.627 | 0.0 | 0.373 |
| 07 | 0.275 | 0.027 | 0.677 | 0.021 |
| 08 | 0.033 | 0.034 | 0.743 | 0.19 |
| 09 | 0.731 | 0.231 | 0.005 | 0.033 |
| 10 | 0.898 | 0.039 | 0.036 | 0.027 |
| 11 | 0.408 | 0.158 | 0.315 | 0.12 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.439 | 0.288 | -0.621 | 0.395 |
| 02 | -3.365 | -2.842 | -3.256 | 1.353 |
| 03 | -2.776 | -3.256 | -1.493 | 1.301 |
| 04 | -0.57 | 1.178 | -3.069 | -1.955 |
| 05 | -2.988 | 1.129 | -3.487 | -0.19 |
| 06 | -4.985 | 0.916 | -4.985 | 0.398 |
| 07 | 0.095 | -2.173 | 0.992 | -2.408 |
| 08 | -1.984 | -1.955 | 1.084 | -0.27 |
| 09 | 1.068 | -0.077 | -3.625 | -1.984 |
| 10 | 1.274 | -1.824 | -1.901 | -2.173 |
| 11 | 0.487 | -0.458 | 0.23 | -0.73 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.48252 |
| 0.0005 | 5.422045 |
| 0.0001 | 7.287085 |