| Motif | ZBTB47.H13INVITRO.0.PSG.A |
| Gene (human) | ZBTB47 (GeneCards) |
| Gene synonyms (human) | KIAA1190, ZNF651 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | A |
| Motif | ZBTB47.H13INVITRO.0.PSG.A |
| Gene (human) | ZBTB47 (GeneCards) |
| Gene synonyms (human) | KIAA1190, ZNF651 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | A |
| Motif length | 20 |
| Consensus | bhRGvvvnKRARGGGTTAAn |
| GC content | 47.12% |
| Information content (bits; total / per base) | 20.403 / 1.02 |
| Data sources | ChIP-Seq + HT-SELEX + Genomic HT-SELEX |
| Aligned words | 491 |
| Previous names |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|
| Overall | 2 (2) | 0.801 | 0.916 | 0.756 | 0.91 | 0.706 | 0.827 | 155.326 | 307.114 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| overall, 4 experiments | median | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 |
| best | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | |
| Lysate, 2 experiments | median | 1.0 | 1.0 | 1.0 | 1.0 | 0.992 | 0.992 |
| best | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | |
| GFPIVT, 2 experiments | median | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 |
| best | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | |
| Genomic HT-SELEX benchmarking | Centrality | pseudo-auROC | auROC | auPR | |
|---|---|---|---|---|---|
| overall, 4 experiments | median | 673.427 | 0.991 | 0.99 | 0.99 |
| best | 1072.377 | 0.999 | 0.997 | 0.995 | |
| Lysate, 2 experiments | median | 626.704 | 0.994 | 0.993 | 0.992 |
| best | 1061.959 | 0.999 | 0.996 | 0.994 | |
| GFPIVT, 2 experiments | median | 860.373 | 0.988 | 0.982 | 0.98 |
| best | 1072.377 | 0.994 | 0.997 | 0.995 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | ZNF652-like {2.3.3.29} (TFClass) |
| TFClass ID | TFClass: 2.3.3.29.2 |
| HGNC | HGNC:26955 |
| MGI | |
| EntrezGene (human) | GeneID:92999 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZBT47_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q9UFB7 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 4 overall: 2 Lysate, 0 IVT, 2 GFPIVT |
| Genomic HT-SELEX | 4 overall: 2 Lysate, 0 IVT, 2 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | ZBTB47.H13INVITRO.0.PSG.A.pcm |
| PWM | ZBTB47.H13INVITRO.0.PSG.A.pwm |
| PFM | ZBTB47.H13INVITRO.0.PSG.A.pfm |
| Threshold to P-value map | ZBTB47.H13INVITRO.0.PSG.A.thr |
| Motif in other formats | |
| JASPAR format | ZBTB47.H13INVITRO.0.PSG.A_jaspar_format.txt |
| MEME format | ZBTB47.H13INVITRO.0.PSG.A_meme_format.meme |
| Transfac format | ZBTB47.H13INVITRO.0.PSG.A_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 67.0 | 225.0 | 118.0 | 81.0 |
| 02 | 43.0 | 212.0 | 30.0 | 206.0 |
| 03 | 134.0 | 7.0 | 319.0 | 31.0 |
| 04 | 10.0 | 6.0 | 455.0 | 20.0 |
| 05 | 87.0 | 224.0 | 111.0 | 69.0 |
| 06 | 232.0 | 140.0 | 90.0 | 29.0 |
| 07 | 235.0 | 114.0 | 88.0 | 54.0 |
| 08 | 96.0 | 101.0 | 172.0 | 122.0 |
| 09 | 6.0 | 113.0 | 254.0 | 118.0 |
| 10 | 385.0 | 41.0 | 49.0 | 16.0 |
| 11 | 457.0 | 9.0 | 19.0 | 6.0 |
| 12 | 361.0 | 7.0 | 105.0 | 18.0 |
| 13 | 6.0 | 3.0 | 460.0 | 22.0 |
| 14 | 41.0 | 4.0 | 444.0 | 2.0 |
| 15 | 1.0 | 0.0 | 490.0 | 0.0 |
| 16 | 0.0 | 0.0 | 0.0 | 491.0 |
| 17 | 0.0 | 0.0 | 1.0 | 490.0 |
| 18 | 490.0 | 0.0 | 1.0 | 0.0 |
| 19 | 488.0 | 3.0 | 0.0 | 0.0 |
| 20 | 118.0 | 149.0 | 63.0 | 161.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.136 | 0.458 | 0.24 | 0.165 |
| 02 | 0.088 | 0.432 | 0.061 | 0.42 |
| 03 | 0.273 | 0.014 | 0.65 | 0.063 |
| 04 | 0.02 | 0.012 | 0.927 | 0.041 |
| 05 | 0.177 | 0.456 | 0.226 | 0.141 |
| 06 | 0.473 | 0.285 | 0.183 | 0.059 |
| 07 | 0.479 | 0.232 | 0.179 | 0.11 |
| 08 | 0.196 | 0.206 | 0.35 | 0.248 |
| 09 | 0.012 | 0.23 | 0.517 | 0.24 |
| 10 | 0.784 | 0.084 | 0.1 | 0.033 |
| 11 | 0.931 | 0.018 | 0.039 | 0.012 |
| 12 | 0.735 | 0.014 | 0.214 | 0.037 |
| 13 | 0.012 | 0.006 | 0.937 | 0.045 |
| 14 | 0.084 | 0.008 | 0.904 | 0.004 |
| 15 | 0.002 | 0.0 | 0.998 | 0.0 |
| 16 | 0.0 | 0.0 | 0.0 | 1.0 |
| 17 | 0.0 | 0.0 | 0.002 | 0.998 |
| 18 | 0.998 | 0.0 | 0.002 | 0.0 |
| 19 | 0.994 | 0.006 | 0.0 | 0.0 |
| 20 | 0.24 | 0.303 | 0.128 | 0.328 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.595 | 0.6 | -0.039 | -0.409 |
| 02 | -1.026 | 0.541 | -1.371 | 0.513 |
| 03 | 0.087 | -2.677 | 0.947 | -1.34 |
| 04 | -2.376 | -2.801 | 1.301 | -1.752 |
| 05 | -0.339 | 0.596 | -0.099 | -0.566 |
| 06 | 0.631 | 0.13 | -0.306 | -1.403 |
| 07 | 0.643 | -0.073 | -0.328 | -0.805 |
| 08 | -0.242 | -0.192 | 0.334 | -0.006 |
| 09 | -2.801 | -0.082 | 0.721 | -0.039 |
| 10 | 1.135 | -1.072 | -0.9 | -1.958 |
| 11 | 1.305 | -2.467 | -1.8 | -2.801 |
| 12 | 1.07 | -2.677 | -0.154 | -1.85 |
| 13 | -2.801 | -3.308 | 1.312 | -1.664 |
| 14 | -1.072 | -3.109 | 1.277 | -3.556 |
| 15 | -3.887 | -4.385 | 1.375 | -4.385 |
| 16 | -4.385 | -4.385 | -4.385 | 1.377 |
| 17 | -4.385 | -4.385 | -3.887 | 1.375 |
| 18 | 1.375 | -4.385 | -3.887 | -4.385 |
| 19 | 1.371 | -3.308 | -4.385 | -4.385 |
| 20 | -0.039 | 0.192 | -0.655 | 0.268 |
| P-value | Threshold |
|---|---|
| 0.001 | -0.31944 |
| 0.0005 | 1.20771 |
| 0.0001 | 4.43386 |