| Motif | ZBTB47.H13INVIVO.0.PSG.A |
| Gene (human) | ZBTB47 (GeneCards) |
| Gene synonyms (human) | KIAA1190, ZNF651 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | A |
| Motif | ZBTB47.H13INVIVO.0.PSG.A |
| Gene (human) | ZBTB47 (GeneCards) |
| Gene synonyms (human) | KIAA1190, ZNF651 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | A |
| Motif length | 19 |
| Consensus | bhRGvvvnbRARGGGTTAA |
| GC content | 45.85% |
| Information content (bits; total / per base) | 19.591 / 1.031 |
| Data sources | ChIP-Seq + HT-SELEX + Genomic HT-SELEX |
| Aligned words | 965 |
| Previous names |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|
| Overall | 2 (2) | 0.81 | 0.915 | 0.76 | 0.908 | 0.704 | 0.824 | 157.253 | 310.42 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| overall, 4 experiments | median | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 |
| best | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | |
| Lysate, 2 experiments | median | 1.0 | 1.0 | 1.0 | 1.0 | 0.992 | 0.993 |
| best | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | |
| GFPIVT, 2 experiments | median | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 |
| best | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | |
| Genomic HT-SELEX benchmarking | Centrality | pseudo-auROC | auROC | auPR | |
|---|---|---|---|---|---|
| overall, 4 experiments | median | 666.927 | 0.991 | 0.989 | 0.99 |
| best | 1064.658 | 0.999 | 0.997 | 0.995 | |
| Lysate, 2 experiments | median | 623.927 | 0.994 | 0.993 | 0.992 |
| best | 1053.585 | 0.999 | 0.995 | 0.993 | |
| GFPIVT, 2 experiments | median | 855.904 | 0.988 | 0.981 | 0.979 |
| best | 1064.658 | 0.994 | 0.997 | 0.995 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | ZNF652-like {2.3.3.29} (TFClass) |
| TFClass ID | TFClass: 2.3.3.29.2 |
| HGNC | HGNC:26955 |
| MGI | |
| EntrezGene (human) | GeneID:92999 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZBT47_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q9UFB7 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 4 overall: 2 Lysate, 0 IVT, 2 GFPIVT |
| Genomic HT-SELEX | 4 overall: 2 Lysate, 0 IVT, 2 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | ZBTB47.H13INVIVO.0.PSG.A.pcm |
| PWM | ZBTB47.H13INVIVO.0.PSG.A.pwm |
| PFM | ZBTB47.H13INVIVO.0.PSG.A.pfm |
| Threshold to P-value map | ZBTB47.H13INVIVO.0.PSG.A.thr |
| Motif in other formats | |
| JASPAR format | ZBTB47.H13INVIVO.0.PSG.A_jaspar_format.txt |
| MEME format | ZBTB47.H13INVIVO.0.PSG.A_meme_format.meme |
| Transfac format | ZBTB47.H13INVIVO.0.PSG.A_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 160.0 | 417.0 | 212.0 | 176.0 |
| 02 | 123.0 | 381.0 | 74.0 | 387.0 |
| 03 | 270.0 | 15.0 | 599.0 | 81.0 |
| 04 | 43.0 | 14.0 | 857.0 | 51.0 |
| 05 | 175.0 | 383.0 | 251.0 | 156.0 |
| 06 | 444.0 | 260.0 | 181.0 | 80.0 |
| 07 | 466.0 | 215.0 | 155.0 | 129.0 |
| 08 | 212.0 | 176.0 | 316.0 | 261.0 |
| 09 | 19.0 | 211.0 | 478.0 | 257.0 |
| 10 | 734.0 | 91.0 | 103.0 | 37.0 |
| 11 | 894.0 | 16.0 | 39.0 | 16.0 |
| 12 | 723.0 | 10.0 | 192.0 | 40.0 |
| 13 | 12.0 | 9.0 | 905.0 | 39.0 |
| 14 | 87.0 | 7.0 | 864.0 | 7.0 |
| 15 | 1.0 | 0.0 | 964.0 | 0.0 |
| 16 | 0.0 | 0.0 | 0.0 | 965.0 |
| 17 | 0.0 | 1.0 | 1.0 | 963.0 |
| 18 | 964.0 | 0.0 | 1.0 | 0.0 |
| 19 | 957.0 | 8.0 | 0.0 | 0.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.166 | 0.432 | 0.22 | 0.182 |
| 02 | 0.127 | 0.395 | 0.077 | 0.401 |
| 03 | 0.28 | 0.016 | 0.621 | 0.084 |
| 04 | 0.045 | 0.015 | 0.888 | 0.053 |
| 05 | 0.181 | 0.397 | 0.26 | 0.162 |
| 06 | 0.46 | 0.269 | 0.188 | 0.083 |
| 07 | 0.483 | 0.223 | 0.161 | 0.134 |
| 08 | 0.22 | 0.182 | 0.327 | 0.27 |
| 09 | 0.02 | 0.219 | 0.495 | 0.266 |
| 10 | 0.761 | 0.094 | 0.107 | 0.038 |
| 11 | 0.926 | 0.017 | 0.04 | 0.017 |
| 12 | 0.749 | 0.01 | 0.199 | 0.041 |
| 13 | 0.012 | 0.009 | 0.938 | 0.04 |
| 14 | 0.09 | 0.007 | 0.895 | 0.007 |
| 15 | 0.001 | 0.0 | 0.999 | 0.0 |
| 16 | 0.0 | 0.0 | 0.0 | 1.0 |
| 17 | 0.0 | 0.001 | 0.001 | 0.998 |
| 18 | 0.999 | 0.0 | 0.001 | 0.0 |
| 19 | 0.992 | 0.008 | 0.0 | 0.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.407 | 0.544 | -0.128 | -0.313 |
| 02 | -0.667 | 0.454 | -1.166 | 0.47 |
| 03 | 0.112 | -2.676 | 0.905 | -1.077 |
| 04 | -1.693 | -2.738 | 1.263 | -1.528 |
| 05 | -0.318 | 0.46 | 0.039 | -0.432 |
| 06 | 0.607 | 0.074 | -0.285 | -1.09 |
| 07 | 0.655 | -0.114 | -0.438 | -0.62 |
| 08 | -0.128 | -0.313 | 0.268 | 0.078 |
| 09 | -2.462 | -0.133 | 0.68 | 0.063 |
| 10 | 1.108 | -0.963 | -0.842 | -1.837 |
| 11 | 1.305 | -2.618 | -1.786 | -2.618 |
| 12 | 1.093 | -3.032 | -0.227 | -1.762 |
| 13 | -2.874 | -3.121 | 1.317 | -1.786 |
| 14 | -1.007 | -3.328 | 1.271 | -3.328 |
| 15 | -4.493 | -4.952 | 1.38 | -4.952 |
| 16 | -4.952 | -4.952 | -4.952 | 1.381 |
| 17 | -4.952 | -4.493 | -4.493 | 1.379 |
| 18 | 1.38 | -4.952 | -4.493 | -4.952 |
| 19 | 1.373 | -3.219 | -4.952 | -4.952 |
| P-value | Threshold |
|---|---|
| 0.001 | -0.40069 |
| 0.0005 | 1.18286 |
| 0.0001 | 4.50996 |