| Motif | ZBTB47.H13RSNP.0.PSG.D |
| Gene (human) | ZBTB47 (GeneCards) |
| Gene synonyms (human) | KIAA1190, ZNF651 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZBTB47.H13RSNP.0.PSG.D |
| Gene (human) | ZBTB47 (GeneCards) |
| Gene synonyms (human) | KIAA1190, ZNF651 |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 20 |
| Consensus | bhRGvvvnbAAAGGGTTAAh |
| GC content | 44.25% |
| Information content (bits; total / per base) | 20.412 / 1.021 |
| Data sources | ChIP-Seq + HT-SELEX + Genomic HT-SELEX |
| Aligned words | 500 |
| Previous names |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|
| Overall | 2 (2) | 0.806 | 0.914 | 0.758 | 0.907 | 0.706 | 0.823 | 156.378 | 308.26 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| overall, 4 experiments | median | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 |
| best | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | |
| Lysate, 2 experiments | median | 1.0 | 1.0 | 1.0 | 1.0 | 0.992 | 0.992 |
| best | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | |
| GFPIVT, 2 experiments | median | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 |
| best | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | |
| Genomic HT-SELEX benchmarking | Centrality | pseudo-auROC | auROC | auPR | |
|---|---|---|---|---|---|
| overall, 4 experiments | median | 675.619 | 0.991 | 0.99 | 0.99 |
| best | 1081.886 | 0.999 | 0.997 | 0.996 | |
| Lysate, 2 experiments | median | 627.297 | 0.994 | 0.993 | 0.992 |
| best | 1064.201 | 0.999 | 0.996 | 0.993 | |
| GFPIVT, 2 experiments | median | 862.0 | 0.988 | 0.981 | 0.98 |
| best | 1081.886 | 0.994 | 0.997 | 0.996 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | ZNF652-like {2.3.3.29} (TFClass) |
| TFClass ID | TFClass: 2.3.3.29.2 |
| HGNC | HGNC:26955 |
| MGI | |
| EntrezGene (human) | GeneID:92999 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZBT47_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q9UFB7 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 4 overall: 2 Lysate, 0 IVT, 2 GFPIVT |
| Genomic HT-SELEX | 4 overall: 2 Lysate, 0 IVT, 2 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | ZBTB47.H13RSNP.0.PSG.D.pcm |
| PWM | ZBTB47.H13RSNP.0.PSG.D.pwm |
| PFM | ZBTB47.H13RSNP.0.PSG.D.pfm |
| Threshold to P-value map | ZBTB47.H13RSNP.0.PSG.D.thr |
| Motif in other formats | |
| JASPAR format | ZBTB47.H13RSNP.0.PSG.D_jaspar_format.txt |
| MEME format | ZBTB47.H13RSNP.0.PSG.D_meme_format.meme |
| Transfac format | ZBTB47.H13RSNP.0.PSG.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 73.0 | 221.0 | 107.0 | 99.0 |
| 02 | 50.0 | 208.0 | 32.0 | 210.0 |
| 03 | 154.0 | 7.0 | 300.0 | 39.0 |
| 04 | 16.0 | 7.0 | 441.0 | 36.0 |
| 05 | 93.0 | 206.0 | 117.0 | 84.0 |
| 06 | 239.0 | 144.0 | 78.0 | 39.0 |
| 07 | 259.0 | 106.0 | 71.0 | 64.0 |
| 08 | 98.0 | 90.0 | 172.0 | 140.0 |
| 09 | 10.0 | 108.0 | 243.0 | 139.0 |
| 10 | 414.0 | 35.0 | 35.0 | 16.0 |
| 11 | 476.0 | 5.0 | 11.0 | 8.0 |
| 12 | 390.0 | 4.0 | 82.0 | 24.0 |
| 13 | 4.0 | 4.0 | 469.0 | 23.0 |
| 14 | 41.0 | 3.0 | 454.0 | 2.0 |
| 15 | 1.0 | 0.0 | 499.0 | 0.0 |
| 16 | 0.0 | 0.0 | 0.0 | 500.0 |
| 17 | 0.0 | 0.0 | 1.0 | 499.0 |
| 18 | 498.0 | 0.0 | 2.0 | 0.0 |
| 19 | 498.0 | 2.0 | 0.0 | 0.0 |
| 20 | 149.0 | 110.0 | 51.0 | 190.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.146 | 0.442 | 0.214 | 0.198 |
| 02 | 0.1 | 0.416 | 0.064 | 0.42 |
| 03 | 0.308 | 0.014 | 0.6 | 0.078 |
| 04 | 0.032 | 0.014 | 0.882 | 0.072 |
| 05 | 0.186 | 0.412 | 0.234 | 0.168 |
| 06 | 0.478 | 0.288 | 0.156 | 0.078 |
| 07 | 0.518 | 0.212 | 0.142 | 0.128 |
| 08 | 0.196 | 0.18 | 0.344 | 0.28 |
| 09 | 0.02 | 0.216 | 0.486 | 0.278 |
| 10 | 0.828 | 0.07 | 0.07 | 0.032 |
| 11 | 0.952 | 0.01 | 0.022 | 0.016 |
| 12 | 0.78 | 0.008 | 0.164 | 0.048 |
| 13 | 0.008 | 0.008 | 0.938 | 0.046 |
| 14 | 0.082 | 0.006 | 0.908 | 0.004 |
| 15 | 0.002 | 0.0 | 0.998 | 0.0 |
| 16 | 0.0 | 0.0 | 0.0 | 1.0 |
| 17 | 0.0 | 0.0 | 0.002 | 0.998 |
| 18 | 0.996 | 0.0 | 0.004 | 0.0 |
| 19 | 0.996 | 0.004 | 0.0 | 0.0 |
| 20 | 0.298 | 0.22 | 0.102 | 0.38 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.529 | 0.565 | -0.153 | -0.23 |
| 02 | -0.898 | 0.504 | -1.328 | 0.514 |
| 03 | 0.206 | -2.694 | 0.868 | -1.138 |
| 04 | -1.975 | -2.694 | 1.252 | -1.215 |
| 05 | -0.291 | 0.495 | -0.065 | -0.392 |
| 06 | 0.642 | 0.14 | -0.464 | -1.138 |
| 07 | 0.722 | -0.163 | -0.556 | -0.658 |
| 08 | -0.24 | -0.324 | 0.316 | 0.112 |
| 09 | -2.394 | -0.144 | 0.659 | 0.105 |
| 10 | 1.189 | -1.242 | -1.242 | -1.975 |
| 11 | 1.328 | -2.961 | -2.311 | -2.584 |
| 12 | 1.129 | -3.126 | -0.415 | -1.6 |
| 13 | -3.126 | -3.126 | 1.313 | -1.64 |
| 14 | -1.09 | -3.325 | 1.281 | -3.573 |
| 15 | -3.903 | -4.4 | 1.375 | -4.4 |
| 16 | -4.4 | -4.4 | -4.4 | 1.377 |
| 17 | -4.4 | -4.4 | -3.903 | 1.375 |
| 18 | 1.373 | -4.4 | -3.573 | -4.4 |
| 19 | 1.373 | -3.573 | -4.4 | -4.4 |
| 20 | 0.174 | -0.126 | -0.879 | 0.415 |
| P-value | Threshold |
|---|---|
| 0.001 | -0.34739 |
| 0.0005 | 1.18351 |
| 0.0001 | 4.41721 |