| Motif | ZBTB8B.H13INVIVO.0.PSGI.A |
| Gene (human) | ZBTB8B (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Zbtb8b |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | A |
| Motif | ZBTB8B.H13INVIVO.0.PSGI.A |
| Gene (human) | ZBTB8B (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Zbtb8b |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | A |
| Motif length | 18 |
| Consensus | hvbYCGGGTAYvdvSSSS |
| GC content | 61.83% |
| Information content (bits; total / per base) | 16.253 / 0.903 |
| Data sources | ChIP-Seq + HT-SELEX + Genomic HT-SELEX + SMiLe-Seq |
| Aligned words | 6466 |
| Previous names |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|
| Overall | 1 (1) | 0.834 | 0.834 | 0.701 | 0.701 | 0.619 | 0.619 | 54.292 | 54.292 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| overall, 3 experiments | median | 1.0 | 1.0 | 0.99 | 0.988 | 0.841 | 0.862 |
| best | 1.0 | 1.0 | 0.998 | 0.997 | 0.977 | 0.974 | |
| Lysate, 2 experiments | median | 0.959 | 0.959 | 0.843 | 0.859 | 0.71 | 0.744 |
| best | 1.0 | 1.0 | 0.99 | 0.988 | 0.841 | 0.862 | |
| IVT, 1 experiments | median | 1.0 | 1.0 | 0.998 | 0.997 | 0.977 | 0.974 |
| best | 1.0 | 1.0 | 0.998 | 0.997 | 0.977 | 0.974 | |
| Genomic HT-SELEX benchmarking | Centrality | pseudo-auROC | auROC | auPR | |
|---|---|---|---|---|---|
| IVT, 1 experiments | median | 90.18 | 0.714 | 0.836 | 0.787 |
| best | 90.18 | 0.714 | 0.836 | 0.787 | |
| SMiLE-Seq benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 1 experiments | median | 0.899 | 0.86 | 0.8 | 0.769 | 0.69 | 0.682 |
| best | 0.899 | 0.86 | 0.8 | 0.769 | 0.69 | 0.682 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | Other with up to three adjacent zinc fingers {2.3.2} (TFClass) |
| TF subfamily | BTB-POZ {2.3.2.1} (TFClass) |
| TFClass ID | TFClass: 2.3.2.1.2 |
| HGNC | HGNC:37057 |
| MGI | MGI:2387181 |
| EntrezGene (human) | GeneID:728116 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:215627 (SSTAR profile) |
| UniProt ID (human) | ZBT8B_HUMAN |
| UniProt ID (mouse) | ZBT8B_MOUSE |
| UniProt AC (human) | Q8NAP8 (TFClass) |
| UniProt AC (mouse) | Q8CII0 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 3 overall: 2 Lysate, 1 IVT, 0 GFPIVT |
| Genomic HT-SELEX | 1 overall: 0 Lysate, 1 IVT, 0 GFPIVT |
| SMiLE-Seq | 1 |
| PBM | 0 |
| PCM | ZBTB8B.H13INVIVO.0.PSGI.A.pcm |
| PWM | ZBTB8B.H13INVIVO.0.PSGI.A.pwm |
| PFM | ZBTB8B.H13INVIVO.0.PSGI.A.pfm |
| Threshold to P-value map | ZBTB8B.H13INVIVO.0.PSGI.A.thr |
| Motif in other formats | |
| JASPAR format | ZBTB8B.H13INVIVO.0.PSGI.A_jaspar_format.txt |
| MEME format | ZBTB8B.H13INVIVO.0.PSGI.A_meme_format.meme |
| Transfac format | ZBTB8B.H13INVIVO.0.PSGI.A_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1560.0 | 1041.0 | 970.0 | 2895.0 |
| 02 | 3317.25 | 1287.25 | 954.25 | 907.25 |
| 03 | 810.0 | 3818.0 | 813.0 | 1025.0 |
| 04 | 796.0 | 4407.0 | 420.0 | 843.0 |
| 05 | 216.0 | 6105.0 | 94.0 | 51.0 |
| 06 | 2.0 | 0.0 | 6463.0 | 1.0 |
| 07 | 0.0 | 1.0 | 6459.0 | 6.0 |
| 08 | 2.0 | 0.0 | 6464.0 | 0.0 |
| 09 | 5.0 | 106.0 | 7.0 | 6348.0 |
| 10 | 6022.0 | 24.0 | 57.0 | 363.0 |
| 11 | 243.0 | 3214.0 | 170.0 | 2839.0 |
| 12 | 2570.0 | 1123.0 | 2041.0 | 732.0 |
| 13 | 2108.0 | 767.0 | 1136.0 | 2455.0 |
| 14 | 3548.0 | 1146.0 | 963.0 | 809.0 |
| 15 | 560.0 | 4704.0 | 689.0 | 513.0 |
| 16 | 499.0 | 4574.0 | 1115.0 | 278.0 |
| 17 | 295.0 | 4008.0 | 1812.0 | 351.0 |
| 18 | 669.0 | 805.0 | 4209.0 | 783.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.241 | 0.161 | 0.15 | 0.448 |
| 02 | 0.513 | 0.199 | 0.148 | 0.14 |
| 03 | 0.125 | 0.59 | 0.126 | 0.159 |
| 04 | 0.123 | 0.682 | 0.065 | 0.13 |
| 05 | 0.033 | 0.944 | 0.015 | 0.008 |
| 06 | 0.0 | 0.0 | 1.0 | 0.0 |
| 07 | 0.0 | 0.0 | 0.999 | 0.001 |
| 08 | 0.0 | 0.0 | 1.0 | 0.0 |
| 09 | 0.001 | 0.016 | 0.001 | 0.982 |
| 10 | 0.931 | 0.004 | 0.009 | 0.056 |
| 11 | 0.038 | 0.497 | 0.026 | 0.439 |
| 12 | 0.397 | 0.174 | 0.316 | 0.113 |
| 13 | 0.326 | 0.119 | 0.176 | 0.38 |
| 14 | 0.549 | 0.177 | 0.149 | 0.125 |
| 15 | 0.087 | 0.727 | 0.107 | 0.079 |
| 16 | 0.077 | 0.707 | 0.172 | 0.043 |
| 17 | 0.046 | 0.62 | 0.28 | 0.054 |
| 18 | 0.103 | 0.124 | 0.651 | 0.121 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.036 | -0.439 | -0.51 | 0.582 |
| 02 | 0.718 | -0.227 | -0.526 | -0.577 |
| 03 | -0.69 | 0.859 | -0.686 | -0.455 |
| 04 | -0.707 | 1.002 | -1.344 | -0.65 |
| 05 | -2.004 | 1.328 | -2.823 | -3.415 |
| 06 | -5.956 | -6.604 | 1.385 | -6.228 |
| 07 | -6.604 | -6.228 | 1.384 | -5.286 |
| 08 | -5.956 | -6.604 | 1.385 | -6.604 |
| 09 | -5.416 | -2.705 | -5.171 | 1.367 |
| 10 | 1.314 | -4.124 | -3.309 | -1.489 |
| 11 | -1.887 | 0.687 | -2.241 | 0.563 |
| 12 | 0.463 | -0.364 | 0.233 | -0.791 |
| 13 | 0.265 | -0.744 | -0.352 | 0.417 |
| 14 | 0.785 | -0.343 | -0.517 | -0.691 |
| 15 | -1.058 | 1.067 | -0.851 | -1.145 |
| 16 | -1.172 | 1.039 | -0.371 | -1.754 |
| 17 | -1.695 | 0.907 | 0.114 | -1.522 |
| 18 | -0.88 | -0.696 | 0.956 | -0.723 |
| P-value | Threshold |
|---|---|
| 0.001 | 1.54391 |
| 0.0005 | 3.05401 |
| 0.0001 | 6.09451 |