ZFP91.H13INVIVO.0.SGI.D motif - HOmo sapiens COmprehensive MOdel COllection

Motif	ZFP91.H13INVIVO.0.SGI.D
Gene (human)	ZFP91 (GeneCards)
Gene synonyms (human)	ZNF757
Gene (mouse)	Zfp91
Gene synonyms (mouse)	Pzf
LOGO
LOGO (reverse complement)
Motif subtype	0
Quality	D

Motif length	21
Consensus	dddnnvTRKMCCTTTAAGRvn
GC content	47.59%
Information content (bits; total / per base)	18.892 / 0.9
Data sources	HT-SELEX + Genomic HT-SELEX + SMiLe-Seq
Aligned words	860
Previous names

HT-SELEX benchmarking		auROC10	auPRC10	auROC25	auPRC25	auROC50	auPRC50
GFPIVT, 1 experiments	median	1.0	1.0	1.0	1.0	1.0	1.0
GFPIVT, 1 experiments	best	1.0	1.0	1.0	1.0	1.0	1.0

Genomic HT-SELEX benchmarking		Centrality	pseudo-auROC	auROC	auPR
GFPIVT, 1 experiments	median	627.575	0.976	0.976	0.973
GFPIVT, 1 experiments	best	739.921	0.983	0.982	0.977

SMiLE-Seq benchmarking		auROC10	auPRC10	auROC25	auPRC25	auROC50	auPRC50
Overall, 3 experiments	median	0.825	0.818	0.677	0.682	0.616	0.619
Overall, 3 experiments	best	0.978	0.971	0.856	0.85	0.731	0.736

TF superclass	Zinc-coordinating DNA-binding domains {2} (TFClass)
TF class	C2H2 zinc finger factors {2.3} (TFClass)
TF family	More than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamily	ZFP91-like {2.3.3.3} (TFClass)
TFClass ID	TFClass: 2.3.3.3.1
HGNC	HGNC:14983
MGI	MGI:104854
EntrezGene (human)	GeneID:80829 (SSTAR profile)
EntrezGene (mouse)	GeneID:109910 (SSTAR profile)
UniProt ID (human)	ZFP91_HUMAN
UniProt ID (mouse)	ZFP91_MOUSE
UniProt AC (human)	Q96JP5 (TFClass)
UniProt AC (mouse)	Q62511 (TFClass)
GRECO-DB-TF	no

ChIP-Seq	0 human, 0 mouse
HT-SELEX	1 overall: 0 Lysate, 0 IVT, 1 GFPIVT
Genomic HT-SELEX	1 overall: 0 Lysate, 0 IVT, 1 GFPIVT
SMiLE-Seq	3
PBM	0

PCM	ZFP91.H13INVIVO.0.SGI.D.pcm
PWM	ZFP91.H13INVIVO.0.SGI.D.pwm
PFM	ZFP91.H13INVIVO.0.SGI.D.pfm
Threshold to P-value map	ZFP91.H13INVIVO.0.SGI.D.thr
Motif in other formats
JASPAR format	ZFP91.H13INVIVO.0.SGI.D_jaspar_format.txt
MEME format	ZFP91.H13INVIVO.0.SGI.D_meme_format.meme
Transfac format	ZFP91.H13INVIVO.0.SGI.D_transfac_format.txt
Homer format	ZFP91.H13INVIVO.0.SGI.D_homer_format_0.001.txt ZFP91.H13INVIVO.0.SGI.D_homer_format_0.0005.txt ZFP91.H13INVIVO.0.SGI.D_homer_format_0.0001.txt

PCM

	A	C	G	T
01	225.0	135.0	332.0	168.0
02	128.0	97.0	448.0	187.0
03	150.0	100.0	365.0	245.0
04	116.0	225.0	307.0	212.0
05	224.0	262.0	167.0	207.0
06	114.0	315.0	396.0	35.0
07	4.0	14.0	107.0	735.0
08	337.0	20.0	408.0	95.0
09	2.0	234.0	251.0	373.0
10	167.0	559.0	110.0	24.0
11	78.0	711.0	49.0	22.0
12	1.0	858.0	1.0	0.0
13	0.0	3.0	0.0	857.0
14	0.0	0.0	0.0	860.0
15	1.0	0.0	0.0	859.0
16	860.0	0.0	0.0	0.0
17	860.0	0.0	0.0	0.0
18	71.0	12.0	765.0	12.0
19	491.0	19.0	232.0	118.0
20	142.25	256.25	363.25	98.25
21	196.5	241.5	231.5	190.5

PFM

	A	C	G	T
01	0.262	0.157	0.386	0.195
02	0.149	0.113	0.521	0.217
03	0.174	0.116	0.424	0.285
04	0.135	0.262	0.357	0.247
05	0.26	0.305	0.194	0.241
06	0.133	0.366	0.46	0.041
07	0.005	0.016	0.124	0.855
08	0.392	0.023	0.474	0.11
09	0.002	0.272	0.292	0.434
10	0.194	0.65	0.128	0.028
11	0.091	0.827	0.057	0.026
12	0.001	0.998	0.001	0.0
13	0.0	0.003	0.0	0.997
14	0.0	0.0	0.0	1.0
15	0.001	0.0	0.0	0.999
16	1.0	0.0	0.0	0.0
17	1.0	0.0	0.0	0.0
18	0.083	0.014	0.89	0.014
19	0.571	0.022	0.27	0.137
20	0.165	0.298	0.422	0.114
21	0.228	0.281	0.269	0.222

PWM

	A	C	G	T
01	0.045	-0.461	0.432	-0.244
02	-0.513	-0.786	0.73	-0.138
03	-0.357	-0.757	0.526	0.13
04	-0.61	0.045	0.354	-0.014
05	0.041	0.196	-0.25	-0.038
06	-0.628	0.379	0.607	-1.776
07	-3.64	-2.625	-0.69	1.224
08	0.447	-2.302	0.637	-0.807
09	-4.073	0.084	0.154	0.548
10	-0.25	0.951	-0.663	-2.132
11	-1.0	1.191	-1.453	-2.213
12	-4.389	1.378	-4.389	-4.854
13	-4.854	-3.833	-4.854	1.377
14	-4.854	-4.854	-4.854	1.38
15	-4.389	-4.854	-4.854	1.379
16	1.38	-4.854	-4.854	-4.854
17	1.38	-4.854	-4.854	-4.854
18	-1.092	-2.762	1.264	-2.762
19	0.821	-2.349	0.076	-0.594
20	-0.409	0.174	0.521	-0.774
21	-0.089	0.115	0.073	-0.12

Standard thresholds

P-value	Threshold
0.001	-0.43354
0.0005	1.20076
0.0001	4.61996