MotifZGLP1.H13RSNP.0.SGB.D
Gene (human)ZGLP1
(GeneCards)
Gene synonyms (human)GLP1
Gene (mouse)Zglp1
Gene synonyms (mouse)Glp1
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length14
ConsensusdhvRTGATCGhKbd
GC content46.91%
Information content (bits; total / per base)13.199 / 0.943
Data sourcesHT-SELEX + Genomic HT-SELEX + PBM
Aligned words7086
Previous names

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
overall, 3 experiments median 0.945 0.918 0.876 0.847 0.736 0.737
best 0.979 0.969 0.932 0.915 0.783 0.791
Lysate, 2 experiments median 0.957 0.942 0.873 0.858 0.733 0.742
best 0.979 0.969 0.932 0.915 0.783 0.791
IVT, 1 experiments median 0.945 0.918 0.876 0.847 0.736 0.737
best 0.945 0.918 0.876 0.847 0.736 0.737

Genomic HT-SELEX benchmarking Centrality pseudo-auROC auROC auPR
Lysate, 2 experiments median 126.165 0.351 0.813 0.664
best 163.921 0.408 0.844 0.713

PBM benchmarking auROC, QNZS auPR, QNZS auROC, SD auPR, SD
Overall, 8 experiments median 0.944 0.057 0.939 0.194
best 0.955 0.188 0.958 0.299
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classOther C4 zinc finger-type factors {2.2} (TFClass)
TF familyC4-GATA-related {2.2.1} (TFClass)
TF subfamilyGATA single {2.2.1.2} (TFClass)
TFClass IDTFClass: 2.2.1.2.8
HGNCHGNC:37245
MGIMGI:3696042
EntrezGene (human)GeneID:100125288
(SSTAR profile)
EntrezGene (mouse)GeneID:100009600
(SSTAR profile)
UniProt ID (human)ZGLP1_HUMAN
UniProt ID (mouse)ZGLP1_MOUSE
UniProt AC (human)P0C6A0
(TFClass)
UniProt AC (mouse)Q1WG82
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 3 overall: 2 Lysate, 1 IVT, 0 GFPIVT
Genomic HT-SELEX 2 overall: 2 Lysate, 0 IVT, 0 GFPIVT
SMiLE-Seq 0
PBM 8
PCM
ACGT
012845.51156.51733.51350.5
02905.52377.5640.53162.5
03962.01623.03856.0645.0
045030.0310.01266.0480.0
056.01467.06.05607.0
060.019.07067.00.0
077086.00.00.00.0
080.00.00.07086.0
090.07085.00.01.0
101585.05.05480.016.0
113883.0991.0908.01304.0
12765.0440.01064.04817.0
13770.753610.751642.751061.75
142067.25723.253066.251229.25
PFM
ACGT
010.4020.1630.2450.191
020.1280.3360.090.446
030.1360.2290.5440.091
040.710.0440.1790.068
050.0010.2070.0010.791
060.00.0030.9970.0
071.00.00.00.0
080.00.00.01.0
090.01.00.00.0
100.2240.0010.7730.002
110.5480.140.1280.184
120.1080.0620.150.68
130.1090.510.2320.15
140.2920.1020.4330.173
PWM
ACGT
010.473-0.426-0.022-0.271
02-0.670.294-1.0150.579
03-0.61-0.0870.777-1.008
041.043-1.737-0.335-1.302
05-5.375-0.188-5.3751.151
06-6.685-4.4261.383-6.685
071.385-6.685-6.685-6.685
08-6.685-6.685-6.6851.385
09-6.6851.385-6.685-6.313
10-0.111-5.5041.128-4.579
110.784-0.58-0.667-0.306
12-0.838-1.389-0.5091.0
13-0.8310.711-0.075-0.511
140.154-0.8940.548-0.365
Standard thresholds
P-value Threshold
0.001 2.39421
0.0005 4.45611
0.0001 7.33261