MotifZNF358.H13INVITRO.0.SG.A
Gene (human)ZNF358
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
A
Motif length25
ConsensusddGWGdYCYTGdhbddbYhnKWdbh
GC content46.8%
Information content (bits; total / per base)13.272 / 0.531
Data sourcesHT-SELEX + Genomic HT-SELEX
Aligned words7252
Previous names

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
GFPIVT, 2 experiments median 0.993 0.991 0.937 0.932 0.83 0.835
best 0.994 0.992 0.977 0.969 0.928 0.915

Genomic HT-SELEX benchmarking Centrality pseudo-auROC auROC auPR
overall, 4 experiments median 248.397 0.903 0.925 0.909
best 660.481 0.937 0.953 0.928
Lysate, 2 experiments median 126.911 0.843 0.863 0.858
best 182.456 0.901 0.925 0.922
GFPIVT, 2 experiments median 362.249 0.912 0.93 0.909
best 660.481 0.937 0.953 0.928
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.77
HGNCHGNC:16838
MGI
EntrezGene (human)GeneID:140467
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN358_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q9NW07
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 2 overall: 0 Lysate, 0 IVT, 2 GFPIVT
Genomic HT-SELEX 4 overall: 2 Lysate, 0 IVT, 2 GFPIVT
SMiLE-Seq 0
PBM 0
PCM
ACGT
011737.0865.02631.02019.0
024211.75620.751286.751132.75
031052.036.05862.0302.0
042687.0215.0186.04164.0
0523.0998.05695.0536.0
063711.0489.01629.01423.0
07987.04333.0200.01732.0
08144.06888.081.0139.0
0945.02572.01138.03497.0
1042.074.033.07103.0
111986.028.05179.059.0
12899.0851.02519.02983.0
133750.01913.0468.01121.0
141008.01364.01702.03178.0
153055.0852.01992.01353.0
161461.0516.02498.02777.0
17628.0838.03687.02099.0
18386.01108.0924.04834.0
191184.03117.0788.02163.0
201820.01341.01628.02463.0
21603.0446.0632.05571.0
22866.0753.0814.04819.0
23948.0832.02999.02473.0
24609.02171.02960.01512.0
251528.253192.25911.251620.25
PFM
ACGT
010.240.1190.3630.278
020.5810.0860.1770.156
030.1450.0050.8080.042
040.3710.030.0260.574
050.0030.1380.7850.074
060.5120.0670.2250.196
070.1360.5970.0280.239
080.020.950.0110.019
090.0060.3550.1570.482
100.0060.010.0050.979
110.2740.0040.7140.008
120.1240.1170.3470.411
130.5170.2640.0650.155
140.1390.1880.2350.438
150.4210.1170.2750.187
160.2010.0710.3440.383
170.0870.1160.5080.289
180.0530.1530.1270.667
190.1630.430.1090.298
200.2510.1850.2240.34
210.0830.0620.0870.768
220.1190.1040.1120.665
230.1310.1150.4140.341
240.0840.2990.4080.208
250.2110.440.1260.223
PWM
ACGT
01-0.043-0.7390.3720.107
020.842-1.069-0.342-0.47
03-0.543-3.8611.173-1.786
040.393-2.123-2.2660.831
05-4.276-0.5961.144-1.216
060.716-1.307-0.107-0.242
07-0.6070.871-2.195-0.046
08-2.5191.334-3.082-2.554
09-3.6490.349-0.4650.656
10-3.715-3.17-3.9421.365
110.091-4.0951.049-3.389
12-0.7-0.7550.3290.497
130.7260.054-1.351-0.48
14-0.586-0.284-0.0630.561
150.521-0.7540.094-0.292
16-0.216-1.2540.320.426
17-1.058-0.770.7090.146
18-1.542-0.492-0.6730.98
19-0.4250.541-0.8320.176
200.004-0.301-0.1070.306
21-1.098-1.399-1.0521.122
22-0.738-0.877-0.7990.977
23-0.647-0.7770.5030.31
24-1.0890.180.49-0.181
25-0.1710.565-0.687-0.112
Standard thresholds
P-value Threshold
0.001 3.81266
0.0005 4.83151
0.0001 6.93616