| Motif | ZNF358.H13INVIVO.0.SG.D |
| Gene (human) | ZNF358 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZNF358.H13INVIVO.0.SG.D |
| Gene (human) | ZNF358 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 25 |
| Consensus | ddGWGdYCYTGdhbddbYhnKWdbh |
| GC content | 46.8% |
| Information content (bits; total / per base) | 13.272 / 0.531 |
| Data sources | HT-SELEX + Genomic HT-SELEX |
| Aligned words | 7252 |
| Previous names |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| GFPIVT, 2 experiments | median | 0.993 | 0.991 | 0.937 | 0.932 | 0.83 | 0.835 |
| best | 0.994 | 0.992 | 0.977 | 0.969 | 0.928 | 0.915 | |
| Genomic HT-SELEX benchmarking | Centrality | pseudo-auROC | auROC | auPR | |
|---|---|---|---|---|---|
| overall, 4 experiments | median | 248.397 | 0.903 | 0.925 | 0.909 |
| best | 660.481 | 0.937 | 0.953 | 0.928 | |
| Lysate, 2 experiments | median | 126.911 | 0.843 | 0.863 | 0.858 |
| best | 182.456 | 0.901 | 0.925 | 0.922 | |
| GFPIVT, 2 experiments | median | 362.249 | 0.912 | 0.93 | 0.909 |
| best | 660.481 | 0.937 | 0.953 | 0.928 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.77 |
| HGNC | HGNC:16838 |
| MGI | |
| EntrezGene (human) | GeneID:140467 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN358_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q9NW07 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 2 overall: 0 Lysate, 0 IVT, 2 GFPIVT |
| Genomic HT-SELEX | 4 overall: 2 Lysate, 0 IVT, 2 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | ZNF358.H13INVIVO.0.SG.D.pcm |
| PWM | ZNF358.H13INVIVO.0.SG.D.pwm |
| PFM | ZNF358.H13INVIVO.0.SG.D.pfm |
| Threshold to P-value map | ZNF358.H13INVIVO.0.SG.D.thr |
| Motif in other formats | |
| JASPAR format | ZNF358.H13INVIVO.0.SG.D_jaspar_format.txt |
| MEME format | ZNF358.H13INVIVO.0.SG.D_meme_format.meme |
| Transfac format | ZNF358.H13INVIVO.0.SG.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1737.0 | 865.0 | 2631.0 | 2019.0 |
| 02 | 4211.75 | 620.75 | 1286.75 | 1132.75 |
| 03 | 1052.0 | 36.0 | 5862.0 | 302.0 |
| 04 | 2687.0 | 215.0 | 186.0 | 4164.0 |
| 05 | 23.0 | 998.0 | 5695.0 | 536.0 |
| 06 | 3711.0 | 489.0 | 1629.0 | 1423.0 |
| 07 | 987.0 | 4333.0 | 200.0 | 1732.0 |
| 08 | 144.0 | 6888.0 | 81.0 | 139.0 |
| 09 | 45.0 | 2572.0 | 1138.0 | 3497.0 |
| 10 | 42.0 | 74.0 | 33.0 | 7103.0 |
| 11 | 1986.0 | 28.0 | 5179.0 | 59.0 |
| 12 | 899.0 | 851.0 | 2519.0 | 2983.0 |
| 13 | 3750.0 | 1913.0 | 468.0 | 1121.0 |
| 14 | 1008.0 | 1364.0 | 1702.0 | 3178.0 |
| 15 | 3055.0 | 852.0 | 1992.0 | 1353.0 |
| 16 | 1461.0 | 516.0 | 2498.0 | 2777.0 |
| 17 | 628.0 | 838.0 | 3687.0 | 2099.0 |
| 18 | 386.0 | 1108.0 | 924.0 | 4834.0 |
| 19 | 1184.0 | 3117.0 | 788.0 | 2163.0 |
| 20 | 1820.0 | 1341.0 | 1628.0 | 2463.0 |
| 21 | 603.0 | 446.0 | 632.0 | 5571.0 |
| 22 | 866.0 | 753.0 | 814.0 | 4819.0 |
| 23 | 948.0 | 832.0 | 2999.0 | 2473.0 |
| 24 | 609.0 | 2171.0 | 2960.0 | 1512.0 |
| 25 | 1528.25 | 3192.25 | 911.25 | 1620.25 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.24 | 0.119 | 0.363 | 0.278 |
| 02 | 0.581 | 0.086 | 0.177 | 0.156 |
| 03 | 0.145 | 0.005 | 0.808 | 0.042 |
| 04 | 0.371 | 0.03 | 0.026 | 0.574 |
| 05 | 0.003 | 0.138 | 0.785 | 0.074 |
| 06 | 0.512 | 0.067 | 0.225 | 0.196 |
| 07 | 0.136 | 0.597 | 0.028 | 0.239 |
| 08 | 0.02 | 0.95 | 0.011 | 0.019 |
| 09 | 0.006 | 0.355 | 0.157 | 0.482 |
| 10 | 0.006 | 0.01 | 0.005 | 0.979 |
| 11 | 0.274 | 0.004 | 0.714 | 0.008 |
| 12 | 0.124 | 0.117 | 0.347 | 0.411 |
| 13 | 0.517 | 0.264 | 0.065 | 0.155 |
| 14 | 0.139 | 0.188 | 0.235 | 0.438 |
| 15 | 0.421 | 0.117 | 0.275 | 0.187 |
| 16 | 0.201 | 0.071 | 0.344 | 0.383 |
| 17 | 0.087 | 0.116 | 0.508 | 0.289 |
| 18 | 0.053 | 0.153 | 0.127 | 0.667 |
| 19 | 0.163 | 0.43 | 0.109 | 0.298 |
| 20 | 0.251 | 0.185 | 0.224 | 0.34 |
| 21 | 0.083 | 0.062 | 0.087 | 0.768 |
| 22 | 0.119 | 0.104 | 0.112 | 0.665 |
| 23 | 0.131 | 0.115 | 0.414 | 0.341 |
| 24 | 0.084 | 0.299 | 0.408 | 0.208 |
| 25 | 0.211 | 0.44 | 0.126 | 0.223 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.043 | -0.739 | 0.372 | 0.107 |
| 02 | 0.842 | -1.069 | -0.342 | -0.47 |
| 03 | -0.543 | -3.861 | 1.173 | -1.786 |
| 04 | 0.393 | -2.123 | -2.266 | 0.831 |
| 05 | -4.276 | -0.596 | 1.144 | -1.216 |
| 06 | 0.716 | -1.307 | -0.107 | -0.242 |
| 07 | -0.607 | 0.871 | -2.195 | -0.046 |
| 08 | -2.519 | 1.334 | -3.082 | -2.554 |
| 09 | -3.649 | 0.349 | -0.465 | 0.656 |
| 10 | -3.715 | -3.17 | -3.942 | 1.365 |
| 11 | 0.091 | -4.095 | 1.049 | -3.389 |
| 12 | -0.7 | -0.755 | 0.329 | 0.497 |
| 13 | 0.726 | 0.054 | -1.351 | -0.48 |
| 14 | -0.586 | -0.284 | -0.063 | 0.561 |
| 15 | 0.521 | -0.754 | 0.094 | -0.292 |
| 16 | -0.216 | -1.254 | 0.32 | 0.426 |
| 17 | -1.058 | -0.77 | 0.709 | 0.146 |
| 18 | -1.542 | -0.492 | -0.673 | 0.98 |
| 19 | -0.425 | 0.541 | -0.832 | 0.176 |
| 20 | 0.004 | -0.301 | -0.107 | 0.306 |
| 21 | -1.098 | -1.399 | -1.052 | 1.122 |
| 22 | -0.738 | -0.877 | -0.799 | 0.977 |
| 23 | -0.647 | -0.777 | 0.503 | 0.31 |
| 24 | -1.089 | 0.18 | 0.49 | -0.181 |
| 25 | -0.171 | 0.565 | -0.687 | -0.112 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.81266 |
| 0.0005 | 4.83151 |
| 0.0001 | 6.93616 |