| Motif | ZNF665.H13CORE.0.PSG.A |
| Gene (human) | ZNF665 (GeneCards) |
| Gene synonyms (human) | ZFP160L |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | A |
| Motif | ZNF665.H13CORE.0.PSG.A |
| Gene (human) | ZNF665 (GeneCards) |
| Gene synonyms (human) | ZFP160L |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | A |
| Motif length | 26 |
| Consensus | hdvRMdAYbdMYYKCGASGhMvvhdn |
| GC content | 56.12% |
| Information content (bits; total / per base) | 16.395 / 0.631 |
| Data sources | ChIP-Seq + HT-SELEX + Genomic HT-SELEX |
| Aligned words | 1486 |
| Previous names |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|
| Overall | 2 (2) | 0.782 | 0.795 | 0.728 | 0.742 | 0.745 | 0.801 | 77.377 | 127.469 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| GFPIVT, 2 experiments | median | 0.996 | 0.996 | 0.95 | 0.948 | 0.839 | 0.845 |
| best | 0.999 | 0.999 | 0.991 | 0.989 | 0.921 | 0.917 | |
| Genomic HT-SELEX benchmarking | Centrality | pseudo-auROC | auROC | auPR | |
|---|---|---|---|---|---|
| GFPIVT, 2 experiments | median | 191.521 | 0.715 | 0.769 | 0.728 |
| best | 303.638 | 0.804 | 0.818 | 0.785 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | ZNF665-like {2.3.3.76} (TFClass) |
| TFClass ID | TFClass: 2.3.3.76.1 |
| HGNC | HGNC:25885 |
| MGI | |
| EntrezGene (human) | GeneID:79788 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN665_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q9H7R5 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 2 overall: 0 Lysate, 0 IVT, 2 GFPIVT |
| Genomic HT-SELEX | 2 overall: 0 Lysate, 0 IVT, 2 GFPIVT |
| SMiLE-Seq | 0 |
| PBM | 0 |
| PCM | ZNF665.H13CORE.0.PSG.A.pcm |
| PWM | ZNF665.H13CORE.0.PSG.A.pwm |
| PFM | ZNF665.H13CORE.0.PSG.A.pfm |
| Threshold to P-value map | ZNF665.H13CORE.0.PSG.A.thr |
| Motif in other formats | |
| JASPAR format | ZNF665.H13CORE.0.PSG.A_jaspar_format.txt |
| MEME format | ZNF665.H13CORE.0.PSG.A_meme_format.meme |
| Transfac format | ZNF665.H13CORE.0.PSG.A_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 197.25 | 588.25 | 183.25 | 517.25 |
| 02 | 186.0 | 178.0 | 588.0 | 534.0 |
| 03 | 452.0 | 717.0 | 209.0 | 108.0 |
| 04 | 233.0 | 124.0 | 1073.0 | 56.0 |
| 05 | 1104.0 | 169.0 | 130.0 | 83.0 |
| 06 | 642.0 | 120.0 | 347.0 | 377.0 |
| 07 | 1227.0 | 71.0 | 143.0 | 45.0 |
| 08 | 68.0 | 1118.0 | 131.0 | 169.0 |
| 09 | 216.0 | 606.0 | 292.0 | 372.0 |
| 10 | 274.0 | 109.0 | 336.0 | 767.0 |
| 11 | 395.0 | 853.0 | 59.0 | 179.0 |
| 12 | 145.0 | 917.0 | 66.0 | 358.0 |
| 13 | 43.0 | 824.0 | 21.0 | 598.0 |
| 14 | 55.0 | 17.0 | 737.0 | 677.0 |
| 15 | 190.0 | 1253.0 | 28.0 | 15.0 |
| 16 | 19.0 | 18.0 | 1446.0 | 3.0 |
| 17 | 1447.0 | 9.0 | 11.0 | 19.0 |
| 18 | 15.0 | 1087.0 | 267.0 | 117.0 |
| 19 | 29.0 | 13.0 | 1435.0 | 9.0 |
| 20 | 279.0 | 741.0 | 201.0 | 265.0 |
| 21 | 465.0 | 870.0 | 51.0 | 100.0 |
| 22 | 413.0 | 374.0 | 620.0 | 79.0 |
| 23 | 311.0 | 722.0 | 231.0 | 222.0 |
| 24 | 729.0 | 264.0 | 239.0 | 254.0 |
| 25 | 755.0 | 218.0 | 264.0 | 249.0 |
| 26 | 304.25 | 278.25 | 314.25 | 589.25 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.133 | 0.396 | 0.123 | 0.348 |
| 02 | 0.125 | 0.12 | 0.396 | 0.359 |
| 03 | 0.304 | 0.483 | 0.141 | 0.073 |
| 04 | 0.157 | 0.083 | 0.722 | 0.038 |
| 05 | 0.743 | 0.114 | 0.087 | 0.056 |
| 06 | 0.432 | 0.081 | 0.234 | 0.254 |
| 07 | 0.826 | 0.048 | 0.096 | 0.03 |
| 08 | 0.046 | 0.752 | 0.088 | 0.114 |
| 09 | 0.145 | 0.408 | 0.197 | 0.25 |
| 10 | 0.184 | 0.073 | 0.226 | 0.516 |
| 11 | 0.266 | 0.574 | 0.04 | 0.12 |
| 12 | 0.098 | 0.617 | 0.044 | 0.241 |
| 13 | 0.029 | 0.555 | 0.014 | 0.402 |
| 14 | 0.037 | 0.011 | 0.496 | 0.456 |
| 15 | 0.128 | 0.843 | 0.019 | 0.01 |
| 16 | 0.013 | 0.012 | 0.973 | 0.002 |
| 17 | 0.974 | 0.006 | 0.007 | 0.013 |
| 18 | 0.01 | 0.731 | 0.18 | 0.079 |
| 19 | 0.02 | 0.009 | 0.966 | 0.006 |
| 20 | 0.188 | 0.499 | 0.135 | 0.178 |
| 21 | 0.313 | 0.585 | 0.034 | 0.067 |
| 22 | 0.278 | 0.252 | 0.417 | 0.053 |
| 23 | 0.209 | 0.486 | 0.155 | 0.149 |
| 24 | 0.491 | 0.178 | 0.161 | 0.171 |
| 25 | 0.508 | 0.147 | 0.178 | 0.168 |
| 26 | 0.205 | 0.187 | 0.211 | 0.397 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.629 | 0.458 | -0.702 | 0.33 |
| 02 | -0.687 | -0.73 | 0.457 | 0.361 |
| 03 | 0.195 | 0.655 | -0.571 | -1.224 |
| 04 | -0.464 | -1.088 | 1.057 | -1.865 |
| 05 | 1.086 | -0.782 | -1.041 | -1.482 |
| 06 | 0.545 | -1.12 | -0.068 | 0.015 |
| 07 | 1.191 | -1.634 | -0.947 | -2.076 |
| 08 | -1.676 | 1.098 | -1.033 | -0.782 |
| 09 | -0.539 | 0.487 | -0.239 | 0.001 |
| 10 | -0.303 | -1.214 | -0.1 | 0.722 |
| 11 | 0.061 | 0.828 | -1.814 | -0.725 |
| 12 | -0.933 | 0.901 | -1.706 | -0.037 |
| 13 | -2.12 | 0.794 | -2.795 | 0.474 |
| 14 | -1.882 | -2.987 | 0.683 | 0.598 |
| 15 | -0.666 | 1.212 | -2.527 | -3.1 |
| 16 | -2.886 | -2.935 | 1.355 | -4.348 |
| 17 | 1.356 | -3.541 | -3.371 | -2.886 |
| 18 | -3.1 | 1.07 | -0.328 | -1.145 |
| 19 | -2.494 | -3.226 | 1.348 | -3.541 |
| 20 | -0.285 | 0.688 | -0.61 | -0.336 |
| 21 | 0.224 | 0.848 | -1.955 | -1.299 |
| 22 | 0.105 | 0.007 | 0.51 | -1.53 |
| 23 | -0.177 | 0.662 | -0.472 | -0.512 |
| 24 | 0.672 | -0.34 | -0.438 | -0.378 |
| 25 | 0.707 | -0.53 | -0.34 | -0.398 |
| 26 | -0.199 | -0.287 | -0.166 | 0.459 |
| P-value | Threshold |
|---|---|
| 0.001 | 2.66771 |
| 0.0005 | 3.82646 |
| 0.0001 | 6.26371 |