Motif | ZNF696.H13INVITRO.0.PSG.A |
Gene (human) | ZNF696 (GeneCards) |
Gene synonyms (human) | |
Gene (mouse) | |
Gene synonyms (mouse) | |
LOGO | ![]() |
LOGO (reverse complement) | ![]() |
Motif subtype | 0 |
Quality | A |
Motif | ZNF696.H13INVITRO.0.PSG.A |
Gene (human) | ZNF696 (GeneCards) |
Gene synonyms (human) | |
Gene (mouse) | |
Gene synonyms (mouse) | |
LOGO | ![]() |
LOGO (reverse complement) | ![]() |
Motif subtype | 0 |
Quality | A |
Motif length | 23 |
Consensus | ddbGTTAAGAARGRbbCdGMKKn |
GC content | 46.95% |
Information content (bits; total / per base) | 23.406 / 1.018 |
Data sources | ChIP-Seq + HT-SELEX + Genomic HT-SELEX |
Aligned words | 1951 |
Previous names |
ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | Centrality, median | Centrality, best |
---|---|---|---|---|---|---|---|---|---|
Overall | 2 (2) | 0.848 | 0.864 | 0.863 | 0.871 | 0.868 | 0.882 | 61.509 | 63.62 |
HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
---|---|---|---|---|---|---|---|
GFPIVT, 1 experiments | median | 0.997 | 0.997 | 0.832 | 0.847 | 0.673 | 0.71 |
best | 0.997 | 0.997 | 0.832 | 0.847 | 0.673 | 0.71 |
Genomic HT-SELEX benchmarking | Centrality | pseudo-auROC | auROC | auPR | |
---|---|---|---|---|---|
GFPIVT, 1 experiments | median | 190.886 | 0.917 | 0.902 | 0.909 |
best | 521.252 | 0.923 | 0.921 | 0.919 |
TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
TF class | C2H2 zinc finger factors {2.3} (TFClass) |
TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
TF subfamily | Unclassified {2.3.3.0} (TFClass) |
TFClass ID | TFClass: 2.3.3.0.78 |
HGNC | HGNC:25872 |
MGI | |
EntrezGene (human) | GeneID:79943 (SSTAR profile) |
EntrezGene (mouse) | |
UniProt ID (human) | ZN696_HUMAN |
UniProt ID (mouse) | |
UniProt AC (human) | Q9H7X3 (TFClass) |
UniProt AC (mouse) | |
GRECO-DB-TF | yes |
ChIP-Seq | 2 human, 0 mouse |
HT-SELEX | 1 overall: 0 Lysate, 0 IVT, 1 GFPIVT |
Genomic HT-SELEX | 1 overall: 0 Lysate, 0 IVT, 1 GFPIVT |
SMiLE-Seq | 0 |
PBM | 0 |
PCM | ZNF696.H13INVITRO.0.PSG.A.pcm |
PWM | ZNF696.H13INVITRO.0.PSG.A.pwm |
PFM | ZNF696.H13INVITRO.0.PSG.A.pfm |
Threshold to P-value map | ZNF696.H13INVITRO.0.PSG.A.thr |
Motif in other formats | |
JASPAR format | ZNF696.H13INVITRO.0.PSG.A_jaspar_format.txt |
MEME format | ZNF696.H13INVITRO.0.PSG.A_meme_format.meme |
Transfac format | ZNF696.H13INVITRO.0.PSG.A_transfac_format.txt |
Homer format |
A | C | G | T | |
---|---|---|---|---|
01 | 686.25 | 260.25 | 582.25 | 422.25 |
02 | 662.25 | 203.25 | 795.25 | 290.25 |
03 | 208.0 | 487.0 | 514.0 | 742.0 |
04 | 9.0 | 3.0 | 1937.0 | 2.0 |
05 | 37.0 | 6.0 | 316.0 | 1592.0 |
06 | 0.0 | 3.0 | 2.0 | 1946.0 |
07 | 1941.0 | 7.0 | 3.0 | 0.0 |
08 | 1937.0 | 5.0 | 8.0 | 1.0 |
09 | 1.0 | 3.0 | 1947.0 | 0.0 |
10 | 1753.0 | 139.0 | 10.0 | 49.0 |
11 | 1875.0 | 8.0 | 48.0 | 20.0 |
12 | 1464.0 | 27.0 | 243.0 | 217.0 |
13 | 5.0 | 10.0 | 1919.0 | 17.0 |
14 | 602.0 | 185.0 | 1103.0 | 61.0 |
15 | 153.0 | 200.0 | 537.0 | 1061.0 |
16 | 159.0 | 319.0 | 570.0 | 903.0 |
17 | 137.0 | 1713.0 | 69.0 | 32.0 |
18 | 577.0 | 243.0 | 258.0 | 873.0 |
19 | 51.0 | 17.0 | 1867.0 | 16.0 |
20 | 1201.0 | 338.0 | 163.0 | 249.0 |
21 | 156.0 | 54.0 | 1470.0 | 271.0 |
22 | 131.75 | 216.75 | 1175.75 | 426.75 |
23 | 372.0 | 361.0 | 724.0 | 494.0 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.352 | 0.133 | 0.298 | 0.216 |
02 | 0.339 | 0.104 | 0.408 | 0.149 |
03 | 0.107 | 0.25 | 0.263 | 0.38 |
04 | 0.005 | 0.002 | 0.993 | 0.001 |
05 | 0.019 | 0.003 | 0.162 | 0.816 |
06 | 0.0 | 0.002 | 0.001 | 0.997 |
07 | 0.995 | 0.004 | 0.002 | 0.0 |
08 | 0.993 | 0.003 | 0.004 | 0.001 |
09 | 0.001 | 0.002 | 0.998 | 0.0 |
10 | 0.899 | 0.071 | 0.005 | 0.025 |
11 | 0.961 | 0.004 | 0.025 | 0.01 |
12 | 0.75 | 0.014 | 0.125 | 0.111 |
13 | 0.003 | 0.005 | 0.984 | 0.009 |
14 | 0.309 | 0.095 | 0.565 | 0.031 |
15 | 0.078 | 0.103 | 0.275 | 0.544 |
16 | 0.081 | 0.164 | 0.292 | 0.463 |
17 | 0.07 | 0.878 | 0.035 | 0.016 |
18 | 0.296 | 0.125 | 0.132 | 0.447 |
19 | 0.026 | 0.009 | 0.957 | 0.008 |
20 | 0.616 | 0.173 | 0.084 | 0.128 |
21 | 0.08 | 0.028 | 0.753 | 0.139 |
22 | 0.068 | 0.111 | 0.603 | 0.219 |
23 | 0.191 | 0.185 | 0.371 | 0.253 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.34 | -0.625 | 0.176 | -0.144 |
02 | 0.305 | -0.87 | 0.487 | -0.516 |
03 | -0.847 | -0.002 | 0.052 | 0.418 |
04 | -3.805 | -4.606 | 1.376 | -4.834 |
05 | -2.533 | -4.128 | -0.432 | 1.18 |
06 | -5.555 | -4.606 | -4.834 | 1.381 |
07 | 1.378 | -4.008 | -4.606 | -5.555 |
08 | 1.376 | -4.263 | -3.902 | -5.131 |
09 | -5.131 | -4.606 | 1.381 | -5.555 |
10 | 1.276 | -1.246 | -3.718 | -2.264 |
11 | 1.344 | -3.902 | -2.284 | -3.107 |
12 | 1.097 | -2.83 | -0.693 | -0.805 |
13 | -4.263 | -3.718 | 1.367 | -3.255 |
14 | 0.21 | -0.963 | 0.814 | -2.052 |
15 | -1.151 | -0.886 | 0.096 | 0.775 |
16 | -1.113 | -0.423 | 0.155 | 0.614 |
17 | -1.26 | 1.253 | -1.932 | -2.67 |
18 | 0.167 | -0.693 | -0.633 | 0.58 |
19 | -2.225 | -3.255 | 1.339 | -3.309 |
20 | 0.899 | -0.365 | -1.088 | -0.669 |
21 | -1.132 | -2.17 | 1.101 | -0.585 |
22 | -1.298 | -0.806 | 0.878 | -0.133 |
23 | -0.27 | -0.3 | 0.394 | 0.013 |
P-value | Threshold |
---|---|
0.001 | -3.10019 |
0.0005 | -1.35404 |
0.0001 | 2.35066 |