MotifZNF724.H13INVIVO.0.PSG.A
Gene (human)ZNF724
(GeneCards)
Gene synonyms (human)ZNF724P
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
A
Motif length19
ConsensushYKRCdTRCTTGGACTTdv
GC content49.75%
Information content (bits; total / per base)21.581 / 1.136
Data sourcesChIP-Seq + HT-SELEX + Genomic HT-SELEX
Aligned words9095
Previous names

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best Centrality, median Centrality, best
Overall 2 (2) 0.916 0.953 0.904 0.945 0.858 0.951 173.87 177.854

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
GFPIVT, 2 experiments median 1.0 1.0 0.996 0.994 0.905 0.913
best 1.0 1.0 0.999 0.998 0.956 0.956

Genomic HT-SELEX benchmarking Centrality pseudo-auROC auROC auPR
overall, 4 experiments median 140.968 0.791 0.813 0.838
best 814.921 0.962 0.974 0.963
Lysate, 2 experiments median 58.739 0.6 0.64 0.685
best 89.215 0.679 0.706 0.764
GFPIVT, 2 experiments median 530.738 0.929 0.952 0.941
best 814.921 0.962 0.974 0.963
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.201
HGNCHGNC:32460
MGI
EntrezGene (human)
EntrezGene (mouse)
UniProt ID (human)ZN724_HUMAN
UniProt ID (mouse)
UniProt AC (human)A8MTY0
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 2 overall: 0 Lysate, 0 IVT, 2 GFPIVT
Genomic HT-SELEX 4 overall: 2 Lysate, 0 IVT, 2 GFPIVT
SMiLE-Seq 0
PBM 0
PCM
ACGT
014661.252625.25813.25995.25
02688.07037.0487.0883.0
03646.0713.06809.0927.0
045264.0498.02173.01160.0
05295.07466.0345.0989.0
063429.0605.04274.0787.0
07411.0327.0553.07804.0
084252.0123.04624.096.0
098.09013.031.043.0
10122.059.077.08837.0
114.04.02.09085.0
12488.098.08298.0211.0
13188.011.08887.09.0
148076.0162.0749.0108.0
15110.08732.083.0170.0
16246.0280.0406.08163.0
1770.0128.094.08803.0
18836.0809.03742.03708.0
193335.01414.03427.0919.0
PFM
ACGT
010.5130.2890.0890.109
020.0760.7740.0540.097
030.0710.0780.7490.102
040.5790.0550.2390.128
050.0320.8210.0380.109
060.3770.0670.470.087
070.0450.0360.0610.858
080.4680.0140.5080.011
090.0010.9910.0030.005
100.0130.0060.0080.972
110.00.00.00.999
120.0540.0110.9120.023
130.0210.0010.9770.001
140.8880.0180.0820.012
150.0120.960.0090.019
160.0270.0310.0450.898
170.0080.0140.010.968
180.0920.0890.4110.408
190.3670.1550.3770.101
PWM
ACGT
010.7170.144-1.026-0.825
02-1.1931.129-1.537-0.944
03-1.256-1.1581.096-0.896
040.839-1.515-0.045-0.672
05-2.0361.188-1.88-0.831
060.411-1.3210.631-1.059
07-1.706-1.933-1.4111.232
080.625-2.90.709-3.142
09-5.41.376-4.225-3.917
10-2.908-3.615-3.3571.357
11-5.893-5.893-6.2761.384
12-1.535-3.1221.294-2.368
13-2.482-5.1441.362-5.307
141.267-2.629-1.108-3.027
15-3.0091.345-3.284-2.581
16-2.216-2.087-1.7181.277
17-3.45-2.861-3.1631.353
18-0.999-1.0320.4980.489
190.383-0.4740.41-0.904
Standard thresholds
P-value Threshold
0.001 -1.06249
0.0005 0.50041
0.0001 3.79941