MotifZNF726.H13INVITRO.0.PSGI.A
Gene (human)ZNF726
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
A
Motif length21
ConsensusdnRnhnWRGRKATTGCTTRnb
GC content44.75%
Information content (bits; total / per base)18.311 / 0.872
Data sourcesChIP-Seq + HT-SELEX + Genomic HT-SELEX + SMiLe-Seq
Aligned words2043
Previous names

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best Centrality, median Centrality, best
Overall 2 (2) 0.921 0.942 0.893 0.911 0.925 0.959 38.078 54.854

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
GFPIVT, 2 experiments median 1.0 1.0 0.998 0.998 0.954 0.957
best 1.0 1.0 0.999 0.999 0.997 0.996

Genomic HT-SELEX benchmarking Centrality pseudo-auROC auROC auPR
GFPIVT, 2 experiments median 459.892 0.92 0.926 0.89
best 675.824 0.941 0.961 0.934

SMiLE-Seq benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 1 experiments median 0.662 0.628 0.588 0.577 0.544 0.546
best 0.662 0.628 0.588 0.577 0.544 0.546
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.226
HGNCHGNC:32462
MGI
EntrezGene (human)GeneID:730087
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN726_HUMAN
UniProt ID (mouse)
UniProt AC (human)A6NNF4
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 2 overall: 0 Lysate, 0 IVT, 2 GFPIVT
Genomic HT-SELEX 2 overall: 0 Lysate, 0 IVT, 2 GFPIVT
SMiLE-Seq 1
PBM 0
PCM
ACGT
01898.75324.75371.75447.75
02426.75700.75408.75506.75
03301.0177.01295.0270.0
04359.0788.0537.0359.0
05590.0857.0249.0347.0
06369.0636.0687.0351.0
07205.0136.0172.01530.0
081188.059.0564.0232.0
0958.053.01813.0119.0
10763.031.01059.0190.0
119.0110.01419.0505.0
121944.038.061.00.0
130.00.00.02043.0
140.00.00.02043.0
1591.00.01729.0223.0
161.02040.02.00.0
173.06.04.02030.0
1832.023.094.01894.0
191030.057.0874.082.0
20315.75592.75388.75745.75
21252.75360.75482.75946.75
PFM
ACGT
010.440.1590.1820.219
020.2090.3430.20.248
030.1470.0870.6340.132
040.1760.3860.2630.176
050.2890.4190.1220.17
060.1810.3110.3360.172
070.10.0670.0840.749
080.5810.0290.2760.114
090.0280.0260.8870.058
100.3730.0150.5180.093
110.0040.0540.6950.247
120.9520.0190.030.0
130.00.00.01.0
140.00.00.01.0
150.0450.00.8460.109
160.00.9990.0010.0
170.0010.0030.0020.994
180.0160.0110.0460.927
190.5040.0280.4280.04
200.1550.290.190.365
210.1240.1770.2360.463
PWM
ACGT
010.564-0.451-0.316-0.131
02-0.1790.315-0.222-0.008
03-0.526-1.0530.928-0.634
04-0.3510.4320.05-0.351
050.1440.516-0.715-0.385
06-0.3240.2190.296-0.373
07-0.907-1.313-1.0811.095
080.842-2.130.099-0.785
09-2.147-2.2341.264-1.445
100.4-2.7460.727-0.983
11-3.85-1.5221.019-0.011
121.334-2.553-2.098-5.595
13-5.595-5.595-5.5951.384
14-5.595-5.595-5.5951.384
15-1.708-5.5951.217-0.824
16-5.1731.382-4.877-5.595
17-4.649-4.172-4.4641.377
18-2.716-3.025-1.6761.308
190.7-2.1640.536-1.81
20-0.4790.148-0.2720.377
21-0.7-0.346-0.0560.615
Standard thresholds
P-value Threshold
0.001 0.28646
0.0005 1.85596
0.0001 5.11661