MotifZNF800.H13RSNP.0.PSG.D
Gene (human)ZNF800
(GeneCards)
Gene synonyms (human)
Gene (mouse)Znf800
Gene synonyms (mouse)Zfp800
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length21
ConsensusGYGhKSShGbKSRWGvKbRYG
GC content67.4%
Information content (bits; total / per base)13.867 / 0.66
Data sourcesChIP-Seq + HT-SELEX + Genomic HT-SELEX
Aligned words268
Previous names

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best Centrality, median Centrality, best
Overall 2 (2) 0.648 0.66 0.422 0.44 0.628 0.642 0.842 1.638

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
overall, 3 experiments median 0.619 0.573 0.604 0.565 0.58 0.552
best 0.661 0.602 0.632 0.586 0.6 0.568
Lysate, 1 experiments median 0.588 0.553 0.564 0.54 0.548 0.532
best 0.588 0.553 0.564 0.54 0.548 0.532
GFPIVT, 2 experiments median 0.64 0.587 0.618 0.575 0.59 0.56
best 0.661 0.602 0.632 0.586 0.6 0.568

Genomic HT-SELEX benchmarking Centrality pseudo-auROC auROC auPR
overall, 3 experiments median 34.62 0.766 0.785 0.609
best 56.071 0.897 0.824 0.657
Lysate, 1 experiments median 27.638 0.848 0.794 0.581
best 29.076 0.897 0.824 0.635
GFPIVT, 2 experiments median 44.388 0.738 0.776 0.617
best 56.071 0.777 0.792 0.657
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyUnclassified {2.3.4.0} (TFClass)
TFClass IDTFClass: 2.3.4.0.17
HGNCHGNC:27267
MGIMGI:1889334
EntrezGene (human)GeneID:168850
(SSTAR profile)
EntrezGene (mouse)GeneID:627049
(SSTAR profile)
UniProt ID (human)ZN800_HUMAN
UniProt ID (mouse)ZN800_MOUSE
UniProt AC (human)Q2TB10
(TFClass)
UniProt AC (mouse)Q0VEE6
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 3 overall: 1 Lysate, 0 IVT, 2 GFPIVT
Genomic HT-SELEX 3 overall: 1 Lysate, 0 IVT, 2 GFPIVT
SMiLE-Seq 0
PBM 0
PCM
ACGT
011.010.0247.010.0
0211.058.050.0149.0
0327.016.0224.01.0
04121.081.010.056.0
0518.013.0142.095.0
061.068.0156.043.0
0729.043.0188.08.0
0850.066.014.0138.0
0935.08.0214.011.0
1027.081.0104.056.0
1124.012.0136.096.0
126.084.0163.015.0
1360.016.0180.012.0
1449.042.012.0165.0
1512.08.0215.033.0
1627.094.0125.022.0
1715.029.0146.078.0
1834.066.0110.058.0
1948.016.0201.03.0
2019.065.019.0165.0
213.017.0244.04.0
PFM
ACGT
010.0040.0370.9220.037
020.0410.2160.1870.556
030.1010.060.8360.004
040.4510.3020.0370.209
050.0670.0490.530.354
060.0040.2540.5820.16
070.1080.160.7010.03
080.1870.2460.0520.515
090.1310.030.7990.041
100.1010.3020.3880.209
110.090.0450.5070.358
120.0220.3130.6080.056
130.2240.060.6720.045
140.1830.1570.0450.616
150.0450.030.8020.123
160.1010.3510.4660.082
170.0560.1080.5450.291
180.1270.2460.410.216
190.1790.060.750.011
200.0710.2430.0710.616
210.0110.0630.910.015
PWM
ACGT
01-3.351-1.7921.29-1.792
02-1.708-0.141-0.2860.788
03-0.879-1.3691.193-3.351
040.5820.186-1.792-0.175
05-1.26-1.5580.740.343
06-3.3510.0150.833-0.432
07-0.811-0.4321.019-1.985
08-0.286-0.015-1.4910.712
09-0.631-1.9851.147-1.708
10-0.8790.1860.432-0.175
11-0.991-1.630.6980.353
12-2.2240.2220.877-1.428
13-0.108-1.3690.975-1.63
14-0.305-0.455-1.630.889
15-1.63-1.9851.152-0.687
16-0.8790.3330.614-1.073
17-1.428-0.8110.7680.149
18-0.659-0.0150.488-0.141
19-0.325-1.3691.085-2.744
20-1.21-0.03-1.210.889
21-2.744-1.3131.278-2.539
Standard thresholds
P-value Threshold
0.001 3.88571
0.0005 4.84666
0.0001 6.87346