MotifZNF865.H13CORE.0.PSG.A
Gene (human)ZNF865
(GeneCards)
Gene synonyms (human)
Gene (mouse)Znf865
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
A
Motif length21
ConsensusGTGTGTGTGYRKGTGTGTGTG
GC content54.5%
Information content (bits; total / per base)27.276 / 1.299
Data sourcesChIP-Seq + HT-SELEX + Genomic HT-SELEX
Aligned words941
Previous names

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best Centrality, median Centrality, best
Overall 2 (2) 0.969 0.992 0.923 0.98 0.969 0.977 492.333 503.745

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
GFPIVT, 2 experiments median 0.926 0.902 0.869 0.845 0.803 0.782
best 0.986 0.98 0.962 0.948 0.913 0.892

Genomic HT-SELEX benchmarking Centrality pseudo-auROC auROC auPR
overall, 3 experiments median 286.387 0.973 0.947 0.872
best 373.569 0.987 0.959 0.901
IVT, 1 experiments median 291.658 0.987 0.954 0.892
best 291.658 0.987 0.954 0.892
GFPIVT, 2 experiments median 284.224 0.968 0.944 0.864
best 373.569 0.983 0.959 0.901
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.259
HGNC
MGI
EntrezGene (human)
EntrezGene (mouse)
UniProt ID (human)ZN865_HUMAN
UniProt ID (mouse)ZN865_MOUSE
UniProt AC (human)P0CJ78
(TFClass)
UniProt AC (mouse)Q3U3I9
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 2 overall: 0 Lysate, 0 IVT, 2 GFPIVT
Genomic HT-SELEX 3 overall: 0 Lysate, 1 IVT, 2 GFPIVT
SMiLE-Seq 0
PBM 0
PCM
ACGT
0177.032.0807.025.0
0213.026.015.0887.0
0322.07.0906.06.0
0415.029.015.0882.0
0530.010.0888.013.0
0622.099.023.0797.0
0755.016.0862.08.0
0829.026.043.0843.0
0919.012.0853.057.0
1043.0536.0101.0261.0
11436.038.0375.092.0
1215.080.0108.0738.0
1337.024.0843.037.0
1420.078.057.0786.0
1527.015.0880.019.0
1647.082.017.0795.0
1736.010.0877.018.0
1813.081.019.0828.0
1949.019.0866.07.0
2015.099.026.0801.0
2134.016.0853.038.0
PFM
ACGT
010.0820.0340.8580.027
020.0140.0280.0160.943
030.0230.0070.9630.006
040.0160.0310.0160.937
050.0320.0110.9440.014
060.0230.1050.0240.847
070.0580.0170.9160.009
080.0310.0280.0460.896
090.020.0130.9060.061
100.0460.570.1070.277
110.4630.040.3990.098
120.0160.0850.1150.784
130.0390.0260.8960.039
140.0210.0830.0610.835
150.0290.0160.9350.02
160.050.0870.0180.845
170.0380.0110.9320.019
180.0140.0860.020.88
190.0520.020.920.007
200.0160.1050.0280.851
210.0360.0170.9060.04
PWM
ACGT
01-1.102-1.951.228-2.183
02-2.779-2.146-2.6521.322
03-2.302-3.3031.343-3.425
04-2.652-2.043-2.6521.316
05-2.011-3.0071.323-2.779
06-2.302-0.856-2.2611.215
07-1.43-2.5941.293-3.195
08-2.043-2.146-1.6681.271
09-2.437-2.851.283-1.395
10-1.6680.819-0.8360.103
110.614-1.7860.464-0.928
12-2.652-1.065-0.771.138
13-1.812-2.2211.271-1.812
14-2.39-1.089-1.3951.201
15-2.111-2.6521.314-2.437
16-1.582-1.041-2.5391.213
17-1.838-3.0071.311-2.487
18-2.779-1.053-2.4371.253
19-1.542-2.4371.298-3.303
20-2.652-0.856-2.1461.22
21-1.892-2.5941.283-1.786
Standard thresholds
P-value Threshold
0.001 -2.55904
0.0005 -1.04774
0.0001 2.20441